Natrinema halophilum: HYG82_19490
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Entry
HYG82_19490 CDS
T06745
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
haly
Natrinema halophilum
Pathway
haly03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haly00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HYG82_19490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haly03021
]
HYG82_19490
Transcription machinery [BR:
haly03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HYG82_19490
Prokaryotic type
Archaeal type
TFB
HYG82_19490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
A2L_zn_ribbon
Zn_ribbon_LysW
DZR_2
HTH_Tnp_ISL3
DUF5817
DUF7560
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
QLG50863
UniProt:
A0A7D5K8M6
LinkDB
All DBs
Position
complement(4096376..4097356)
Genome browser
AA seq
326 aa
AA seq
DB search
MTNAPSNTRVRRSDPETNEQEAESESTDLVCPECTGQLIVDDEHGETVCEDCGLVVEEDS
VDRGPEWRAFDAAEKNEKSRVGAPTTNTMHDKGLSTNIDWRNKDAYGNSLGSRQREKMQR
LRKWNERFRTRDSKERNLKQALGEIDRMASALGLPTNVRETASVIYRRALDEDLLPGRSI
EGVSTACVYAAARQAGVPRSLDEIADVSRVEKNEIARTYRYVVRELGLEVQPADPESYVP
RFASGLELSDEAEHRARSLLQNAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAAVSD
VADISEVTIRNRYHELLEAEETVGLA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgactaacgcaccatcgaacacgagagtacgacgtagcgatcccgaaacaaacgaacag
gaagccgaaagcgaatcgacagacctggtctgtcccgagtgtacgggtcaactcatcgtc
gacgacgagcacggagagactgtctgtgaagactgcggactcgtcgtcgaggaggattcg
gtcgaccgtggccccgagtggcgtgcgttcgacgccgcagaaaagaacgagaaatcccgt
gtcggtgcgcccacgacgaatacgatgcacgacaaaggactctcgacaaacatcgactgg
cgcaataaagacgcctacggcaattcgctcggctcgcgccagcgcgagaagatgcagcgc
ctgcgaaaatggaacgagcgatttcgcacccgcgactcgaaggagcgaaacctcaagcaa
gcgctgggagaaatcgatcggatggcctccgcgctcggcctgccgacgaacgtccgtgaa
acggccagcgtcatttatcggcgagcgctcgacgaggacctccttcccggtcggtctatc
gagggcgtctcgacggcctgtgtctacgccgccgcacgtcaggccggcgttccccgaagt
ctcgacgaaattgccgacgtctcccgcgtagagaaaaacgagatcgcccgcacctatcgg
tacgtcgtccgcgaactcggtctcgaggtccaacccgcagacccagaaagctacgtgcct
cgtttcgcttcgggtctcgagctctcggacgaagccgaacaccgcgcacgatcgctgctc
cagaacgccaaggagaaaggcgtccactccggcaagtcgccggtcggcctcgctgcggca
gcagtctacgcagccgccttgttgaccaacgagaagaccacccaggccgcggtcagcgat
gtcgccgatatctccgaagtcacgattcgaaatcggtaccacgaactcctcgaagccgag
gagacggtcggtctggcctaa
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