KEGG   Halomicrobium mukohataei JP60: E5139_00050
Entry
E5139_00050       CDS       T05947                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
halz  Halomicrobium mukohataei JP60
Brite
KEGG Orthology (KO) [BR:halz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:halz03016]
    E5139_00050
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:halz02048]
    E5139_00050
Transfer RNA biogenesis [BR:halz03016]
 Prokaryotic type
  tRNA degradation factors
   E5139_00050
Prokaryotic defense system [BR:halz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    E5139_00050
SSDB
Motif
Pfam: PIN PIN_4
Other DBs
NCBI-ProteinID: QCD64094
UniProt: A0A4D6K8U0
LinkDB
Position
9318..9725
AA seq 135 aa
MIVDTSFVLDVIGNVEAAVTKERELEAESVPLVIPSMTVLELYIGVGKVANTRQERQAVE
AVLDSYPVIDMTPSISRRAGRLLGERMAETNEDEGPGIGKGDATIAATALERDEPILTGD
SHFENIPGITVETYR
NT seq 408 nt   +upstreamnt  +downstreamnt
atgatcgttgatacgagcttcgtcctagatgttatcggcaatgtcgaggccgccgtaacg
aaagaacgggaactcgaagcagagagcgtcccgttagtaatcccgtcaatgacggtctta
gaactctacatcggtgtcgggaaggtagcgaacactcgccaagagcgtcaagcggtggaa
gctgtactcgattcttacccggtcatagatatgaccccgagcatctcccgtcgcgcgggg
cgacttctcggcgagcgcatggcggagacaaacgaggacgaaggacctggaatcgggaag
ggagacgccacaatcgcagcgacggctctggagcgtgacgaaccgattctcactggcgac
agccacttcgagaacatcccgggtatcaccgtcgaaacgtaccggtga

DBGET integrated database retrieval system