Halomicrobium mukohataei JP60: E5139_00685
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Entry
E5139_00685 CDS
T05947
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
halz
Halomicrobium mukohataei JP60
Pathway
halz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
halz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E5139_00685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halz03021
]
E5139_00685
Transcription machinery [BR:
halz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
E5139_00685
Prokaryotic type
Archaeal type
TFB
E5139_00685
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF5816
Cyclin_N
Sigma70_r4
Cas12f1-like_TNB
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
QCD64215
UniProt:
A0A4D6KAQ8
LinkDB
All DBs
Position
112387..113340
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AA seq
317 aa
AA seq
DB search
MERPTRQREHDGTQEQETEESEQTCPECDSTAISTDGSGELICEDCGLVIEDENIDRGPE
WRAFNHSERQSKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSKKRSQMHRLRKWQE
RIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALDEDLIRGRSIEGVATS
CLYAACRQEGIPRSLEEVSDVSRVEQKEIGRTYRYVAQELKLKMEPVDPKQYVPRFASEL
ELSEEVQSKANEIIDVTAEQGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVAQVTE
VTIRNRYQEQIEAMGIH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccccacccgccagcgcgagcacgacgggacgcaggagcaggagacggaagaa
tccgagcagacctgtcctgagtgtgactcgacggcaatatcgacggacgggagcggcgaa
ctcatctgcgaagactgcggactcgtcatcgaagatgagaacatcgaccgcggcccggaa
tggcgcgcgttcaaccattctgaacggcagagcaagtcccgcgtcggggcaccgacgacc
cagacgatgcacgacaaggggctgacgacgacgatcgactggaaggacaaggacgcgtac
ggccggtccatctcgtcgaagaagcggtcccagatgcaccgactgcgaaagtggcaggag
cgaatccggacgaaggacgcgggggagcgaaacctccagtttgccctctcggagatcgat
cggatggcgtcggcactgggcgttcctcgttcggtgcgagaagtcgcgtcggtgatctac
cggcgcgcgctggacgaggacctcatccgcggccgttccatcgagggcgtcgcgacctcc
tgtctgtacgccgcctgccgacaggaaggcatcccacggagcctcgaagaggtctcggac
gtctctcgggtcgagcaaaaggagatcgggcgcacgtatcgctacgtcgcccaggagctc
aagctcaagatggagccggtcgaccccaaacagtacgtgccgcgcttcgccagcgaactc
gaactgagcgaggaggtccagtcgaaggccaacgagatcatcgacgtgaccgccgagcag
ggcctgctgtcgggcaagtcccccacgggctacgccgcggcggcgatctacgccgcgtcg
ctgctgtgcaacgagaagaagacccagcgagaggtcgccgacgtcgcccaggtgaccgaa
gtgacgatccggaaccgctaccaggaacagatcgaagcgatgggcatccactga
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