Halomicrobium mukohataei JP60: E5139_01440
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Entry
E5139_01440 CDS
T05947
Symbol
cas8b
Name
(GenBank) type I-B CRISPR-associated protein Cas8b/Csh1
Organism
halz
Halomicrobium mukohataei JP60
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cas_TM1802_C
Cas_TM1802_M
Motif
Other DBs
NCBI-ProteinID:
QCD64362
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Position
261983..264088
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AA seq
701 aa
AA seq
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MLDPDEFYDEYPPEKLEDELPERPISSLRDIQHLYGRLYTLATAGGGDYAAYLTPDQAND
LIGTEESLIAVCVDLSGERPTLDAEEPVRVTQYTDDLVQRVAHCKYNAARGIDHSVTHRS
GRNSDPEKLARYACERLTKWATDDVVQSIADDHPDGDVIRGLATVGEDENALDRIREAVQ
TELGGSTTALLTVQVRREEGGEYEWPGQISVFDEAMRARKLSKLVSKGQATNSAGEATDL
VSGERTRTVGTAEDPLNYFLGKQMEKFPGLDPDEAWRSHPISEDGAVTLMNAEEFVDACS
YRTFNADVYYLPYFLGRPTPEETYKLYAALHRVTRDDDMNPVQALYDEFGDHEAAPEGRL
RFYVAAVMKHQMSRFDVYGETLNGRIHYPTEVGQRHEQVTGSWVFDEDDARNGGRTPPMP
SHEEWALTNYQRFREMVASGAYLYGTFPFTDEDTDATVDDERIDVHVSILAGDPVPRNQL
VSAYVDRLLDRDGDEVPELLIASQFAQLCALENAGLVTTDAGETEPTLIDGPDYDTMEPE
HARTDGGTAALDRTEKLESFIEQTDGLDDAERKGAFLLGTLVGQVGTYQQGYHDRSTTVI
DQYPIKSMTKTKIKRITQEVIDKDVVYSREMAKKGSEINSTMYKEVTNAIVETMAESDPS
DWEISTDDLRFYYALGLTYGMNDRSTNENDAADDETSETNE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatcccgacgagttctacgatgagtatccgcccgagaagctcgaagacgagctc
cccgagcgaccgatctcgtcgctgcgggacatccagcacctctacgggcgactctacacg
ctggcgacggccggcggcggcgactacgcggcctatctgacgcccgatcaggccaacgat
ctgatcgggacagaggagagcctgatcgccgtctgcgtcgatctgtccggagagcggccg
acgctcgacgcggaggaacccgtccgggtgacccagtacaccgacgacctggtacagcgg
gtcgctcactgcaagtacaacgcggcgcgggggatcgaccacagcgtcacgcaccgctcc
ggacgcaacagcgatcccgagaaactggcccggtacgcctgcgagcggctgacgaagtgg
gcgaccgacgacgtggtccagagcatcgcagacgatcaccccgacggcgacgtgatccgc
ggactggcgaccgtcggcgaggacgagaacgccctcgacaggattcgagaggccgtccag
accgagctcggcggttcgacgacagcgctcctcaccgtgcaggtgcgccgggaggagggc
ggcgagtacgagtggccgggacagatttccgtgttcgacgaagcgatgcgtgcgcggaag
ctctcgaagctcgtctcgaaggggcaggcgacgaactctgccggcgaggcgacggatctc
gtcagcggcgaacggacgcgaaccgtcggcaccgccgaggatccgctcaactacttcctg
ggcaagcaaatggagaagttcccggggctggatcccgacgaggcctggcggagccacccc
atctccgaggacggcgcggtcacgctgatgaacgccgaggagttcgtcgacgcctgttcc
taccggacgttcaacgccgacgtgtattacctcccgtacttcctcggacgaccgacgccc
gaagagacgtacaagctgtacgcggcactccacagagtcacacgggacgacgacatgaat
ccggttcaggcgctctacgacgagttcggcgaccacgaggcggcgcccgaggggcgactg
cgcttctacgtcgcggcggtgatgaaacaccagatgtcccgattcgacgtgtacggcgag
acgctgaacggccggatccactacccgaccgaggtcgggcagcgacacgagcaggtgacc
ggcagctgggtcttcgacgaggacgacgccaggaacggaggtcggacgccgccgatgccc
tcccacgaagagtgggcgctcactaattaccagcggtttcgagagatggtcgcgtcgggt
gcctatctctacggcaccttcccgttcaccgacgaggacaccgacgcgacggtcgacgac
gagcgaatcgacgttcacgtctcgatccttgccggcgatcccgtcccgcggaaccaactg
gtcagcgcctacgtcgatcgattgctcgaccgtgacggtgacgaagtccccgaactcctg
atcgcctcccagttcgcacagctgtgcgcgctggaaaacgccggcctcgtgacgacggac
gccggcgagaccgaaccgacgctgatcgacggccccgattacgacactatggaaccagaa
cacgcgcgaaccgacggcggcactgctgccctcgatcgcaccgagaaactcgaatcgttc
atcgaacagacggacggactggacgacgccgaacggaagggagcattcctgctcggcacg
ctcgtcggccaggtcggcacctaccagcaggggtatcacgatcgatcgacgaccgtcatc
gaccagtacccgatcaagtcgatgaccaagacgaagatcaagcgcatcacccaagaggtg
atcgacaaagacgtagtctactcccgggagatggccaagaaagggtcggagatcaattcg
acgatgtacaaggaagttacgaacgccatcgtcgagaccatggccgaaagcgatccgtcg
gactgggagatcagcaccgacgatctgcgcttctactacgccctgggactgacctacgga
atgaacgaccgatcgactaacgagaacgacgctgccgacgacgaaacctcagaaaccaat
gagtga
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