Halomicrobium mukohataei JP60: E5139_01770
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Entry
E5139_01770 CDS
T05947
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
halz
Halomicrobium mukohataei JP60
Brite
KEGG Orthology (KO) [BR:
halz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halz03400
]
E5139_01770
DNA repair and recombination proteins [BR:
halz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5139_01770
Archaeal homologous recombinant proteins
E5139_01770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_13
AAA_29
AAA_27
ZnF_RZ-type
Phage_GP20
Seryl_tRNA_N
DUF1192
MukB
ATG17_like
DUF5795
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QCD64426
UniProt:
A0A4D6KG38
LinkDB
All DBs
Position
complement(330084..332759)
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AA seq
891 aa
AA seq
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MRISRVRMENFKCYGEADLRLDRGVTIIHGLNGSGKSSLLEACFFALYGTKALDENLDEI
VSIGADDATVELWFSHGGGDFHIERRVRATGERATTAKCVLETPEGSFDGARAVRRRVTE
LLRMDSEAFVNCAYVRQGEVNKLINASPSQRQDMLDDLLQLGKLEEYRERASDARVGIGR
VRDDKQGALGQLEEQIAEKEERDLYDRLNELRSQIAQTSEEIERIEGQRERAVETRDDAQ
SIIDDHEERQAELDELEAEIDELRETIAETERERDEIDERIRDRKETLSERETELREAVA
ESALDSADSEAVSDRIDELTARDDELRDRIEQQRVAASEHGSEAESLRESAATLDERATE
KREEAERLEAELADTREDVRERRDQLDEIDERIETLAARFEGAPVDRDGVEDHRDEVAST
LEDARQRVTELETTLETERERVAEAQQLLEAGKCPECGQDVGDSPHVAEIDERRDRIEEH
ERELEAARETVTTREERLERAEQLVETAAEIETLETRRDDVTRLIEDRESGLDEEEDRIE
QLRADAEELASEADEKREAATEAEQAAQECRDVVADCNQQRQECKTELERLERIETLLAA
VEDCEDDLERLREQRQQKGEINDERRERLADKRERTSALEAEFDDANVQEARAERERATE
YIQQADDKLDELRAERDDLQASAGAVENEIEALEELRDRRDELAATVEKLATLYEEAEEL
ESMYGTVRAELRQRNVETLERMLNDVFDLVYQNDSYSHIELDGEYQLTVYQKDGEALDPE
QLSGGERALFNLSLRCAIYRLLAEGIEGAAPMPPLILDEPTVFLDSGHVSRLLGLIEFMR
DDVGVEQIVVVSHDEELVGAADALVRVEKNSTTNRSTAQRVEAGVVADAAD
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaggatctctcgggtccggatggagaacttcaagtgttacggcgaggccgacctgcgg
ctcgaccgcggcgtgacgatcatccacggcctcaacggcagcgggaagtcctcgctgctg
gaggcctgtttcttcgcgctctacgggaccaaggccctcgacgagaacctcgacgagatc
gtctcgatcggggccgacgacgcgaccgtcgagctgtggttcagccacggcggcggcgac
ttccacatcgagcgccgggtccgggcgacgggcgagcgagcgacgaccgccaagtgcgtc
ctcgaaacaccggaggggagcttcgacggggctcgcgccgtccgccgccgcgtcaccgaa
ctcctccggatggacagcgaggcgttcgtcaactgtgcgtacgtcaggcagggcgaggtc
aacaagctgatcaacgcttcgccgagccagcgccaggacatgctcgacgacctcctccag
ctcgggaagctagaggagtaccgcgagcgggcgagcgacgcccgcgtcggcatcggccgc
gttcgcgacgacaaacagggcgcgctgggccagctcgaagagcagatcgccgagaaggag
gagcgtgacctctacgaccgtctcaacgaactccggagccagatcgcccagaccagcgag
gagatcgaacgcatcgaaggccagcgcgagcgggcagtcgagacccgagacgacgcccag
tcgatcatcgacgaccacgaggagagacaggccgaactcgacgaactcgaagccgagatc
gacgagctccgcgaaacgatcgccgaaaccgaacgggagcgagacgagatcgacgagcga
attcgggaccgaaaggagacgctgagcgagcgcgagacggagctccgggaggccgtcgcc
gagagcgccctcgacagcgccgactccgaggccgtctcggaccggatcgacgaactgact
gcccgcgacgacgagctgcgagaccggatcgaacagcagcgggtcgcggcctcggaacac
ggcagcgaggccgagtcgctgcgcgagagcgccgcgactctcgacgagcgagccacggag
aaacgcgaggaggccgagcggctcgaagccgagttggccgatacccgcgaggacgtacgg
gaacggcgcgaccaactcgacgagatcgacgagcgaatcgagacactcgcggcccgcttc
gagggggcaccggtggatcgagacggcgtcgaagaccaccgcgacgaggtcgcgtcgacg
ctcgaagacgcgcgccagcgggtcacggaactggagacgacgctcgaaaccgaacgcgag
cgcgtcgccgaggcccagcagctcctcgaagccgggaagtgtcccgagtgcggacaggac
gtgggagactcacctcacgtcgcggagatcgacgaacggcgcgaccgcatcgaggaacac
gaacgtgaactcgaagcggctcgcgagacggtgacgacccgcgaggagcgactcgaacga
gccgagcaactcgtcgagacggcggccgagatcgagacgctggagacgagacgcgacgac
gttacgcgcttgatcgaggaccgcgagtcgggactcgacgaggaggaagaccggatcgaa
cagctccgggccgacgccgaggagttggcctcggaggccgacgagaagcgcgaggcggcc
accgaggccgagcaagcggcccaggagtgtcgcgacgtcgtcgcagactgcaatcagcag
cgccaggagtgcaagacggagctggaacggctcgaacgcatcgagacgctgctcgcggcg
gtcgaggactgtgaggacgacctcgaacgactgcgcgagcagcgccagcagaaaggcgag
atcaacgacgagcgccgcgagcgactcgccgacaagcgagagcgcacgtccgccctcgaa
gcggagttcgacgacgcaaacgtccaggaggcccgcgcggaacgcgagcgggcgacggag
tacatccagcaggcagacgataagctcgacgaactccgggccgaacgcgacgacttacag
gcgagtgccggggccgtcgaaaacgagatcgaggccctggaggagctccgtgaccgtcgc
gacgaactggcggcgaccgtcgagaagctcgcgacgctgtacgaggaagccgaggagctg
gagtcgatgtacggcaccgtccgagcggagctgcgccagcgcaacgtcgagacgctcgaa
cggatgctcaacgacgtgttcgatctggtctaccagaacgactcgtactcgcacatcgaa
ctcgacggagagtaccagctgacggtgtaccagaaagacggcgaggcgctcgatcccgag
cagctctcggggggcgagcgcgcgctgttcaacctcagtctccgatgtgcgatctaccgc
ctgctggccgaggggatcgagggggccgcaccgatgccgccgctgatcctcgacgagccg
accgtctttctcgactccgggcacgtctcacggctgctcggcctgatcgagttcatgcgc
gacgacgtgggcgtcgagcagatcgtcgtcgtcagccacgacgaggaactcgtgggtgcg
gccgacgcgctggtccgcgtcgaaaagaactcgacgaccaaccgctcgacggcacagcga
gtcgaggcgggcgtcgtcgcggacgccgcggactag
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