Halomicrobium mukohataei JP60: E5139_02990 Help Entry E5139_02990       CDS       T05947                                  Name (GenBank) PAS domain S-box protein   KO K06930   HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins Organism halz  Halomicrobium mukohataei JP60 Brite KEGG Orthology (KO) [BR:halz00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:halz03000]     E5139_02990 Transcription factors [BR:halz03000]  Prokaryotic type   Helix-turn-helix    Other families     E5139_02990 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAS_4 PAS_9 PAS PAS_3 BAT GAF_2 GAF PAS_8 HTH_10 PAS_10 GAF_3 Diguanyl_cycl_sensor HAMP Sigma70_r4 PAS_7 HTH_5 HTH_24 HTH_11 Motif Other DBs NCBI-ProteinID:  QCD64658 UniProt:  A0A4D6K8P9 LinkDB All DBs Position complement(587827..592596) Genome browser AA seq 1589 aa AA seqDB search MISLWHDVVPFVGAASGEWFFSVSGGVTGFDTFSIAFVLTGLVGLAVRGDADDPIAQLTE KVRRVAAGADDVTFTTDRDDEIGALYDAIDDLVTATDAEDQTDEAFRRSIYEITSDPALD DDAKLDRLLELGCERLGVETGFIAQIDQADGRYEIERATGPLVAEESVFDLSETLCRRTI TSDDVLGIADTAAASDLDDSEYADSDVRSYIGSKLLVDGELYGTLCFVGPEPRERPFSHA EKAFVDLVGRWISQTVERRERMETLERHASMLDSLFEELPVSLYVKDEAGRHLRKSVSDR VTEFPDDEEWYRGKTDLDIYDEELARQTYADDMQVIESGEPIIGKEEYNPVAEEWVVSSK VPWRGPDGEVCGLIGVTQYVTERKEHERKLEAIVQNTTNQIYIKDSDGVYQFVNEATAEL FDREPAEILGKRDDELFDSGTTEALISEDRNVLSSGETVTTTTTAEIDGERRSFLDNKYP YRDESGEIIGVMGISKDITERQARERKLRERKRELATLMSNLPGMVYRCRNEPDWPFEFV SDGCRELTGYEPAAIRSGAVNWAEDIIVGDNDELWETVQRAVDEHEQFEVTYPIETADGQ RRWLWERGVGIYDDDGTVRALEGVVTDVTDRKARERELRRTNERLNTLIDASPDALILTD PDGVVELWNPAAERIFGWSESEVVGDTLPFVPADRESEFDAFRERLLSGESISSVETRRR RTDGTLIDVSLSAAPLRDVDGEITGIMAVMEDITERKCQERQLREHQRELDRYREFTEDI LDAVDDVFYVLDEDGSLQRWNSAHTQVTGYSDAEIESMHATDFFAPEHRSEIEAAIEETK ATGDAVVEVPYLTKDGEQVPHEFVAVALEDPDGNQLVAGIGRDISERKRRERQLERTTDL LSRAEEMAAIGGWAAVVEDGAAVDTTWTDKLFDIFGLADDEARSVEAMPQFYHPDDRERH RDAIERALDHGIGWEQELRLDTPDGTQRWVHTIGEPVLEDGTVVEIRGSVQDITAQKQRE LALESLHDSARGLLTTESIDDATRLIVDTAASLLDQAAVGIYLYDETTNLLEPASVSPGF EALCGGEPDAVGPGTESFLWHAYVTGTQSVLEGVDTSGESGLFVDAVDTGIVVPIGSHGV FAALDEAGEIGERDRSLVETLVATAAAAFERLESEATLREREAEIEAQNERLRRQIRANE TIRSVDQTLIGATDRDQLEAAVCERLVDDEDISFAWIGSFDSGGETLQARAWAGEGESYL DTPSFDRSATHSDPAVSAAVDDEPVAVSNIAQNVQQAAWRRAALAVGHQSALAVPVSLDD YQYGVLAVYADEPDVFGEFETAVFAELGTSIANAITSITTRQALNADTLTALELCVEDTT DPLLDIAFESGCTVTYEGVGTVSSDETRLFVRVSGCAPATVSELLADRHTIADHHLVSES EDGGVFEVTIRGETVLARLARQGGRVRKIAAEGSGIDIEVDVPTSVDVRSFVETLTDDGT VELVSRRERARSPESDPALAESILGALTDRQREVLRTGYFSGFFNWPRDTTGQELAAMLD VSQPTVNRHLRLGQQRVMRRLFDDEPEAE NT seq 4770 nt NT seq  +upstreamnt  +downstreamnt atgatctcactctggcacgacgtggtcccgttcgtcggggcggccagcggggagtggttc ttctcggtctccggcggcgtgacggggtttgacacgttctcgatcgcgttcgtgcttacc ggactggtcggcctggcggtccggggcgacgccgacgatccgatcgcacagttgaccgag aaggtgcgtcgcgtggcagccggcgcggacgacgtcacgttcacgaccgaccgcgacgac gagatcggtgcgctgtacgacgcgatcgacgacctcgtcactgcgaccgacgccgaggac cagaccgacgaggcgtttcgccgttcgatctacgagatcacgagcgatccggcgctcgac gacgacgcgaaactcgaccggctgctcgaactgggctgtgagcgactcggggtcgagacc ggcttcatcgcacagatcgaccaggccgacgggcgctacgagatcgagcgggcgaccggc ccgctcgtcgccgaggagagcgtgttcgacctctccgagacgctctgtcgtcggacgatc acgtccgacgacgtgctcggtatcgccgacacggccgcggcgagcgacctcgacgactcc gagtacgcggactcggacgtgcgcagctacatcggctcgaagctactcgtcgatggggaa ctgtacgggacgctctgtttcgtcggcccggagccccgagagcgtccgttcagccacgca gagaaggccttcgtcgatctcgtgggtcggtggatcagccagaccgtcgagcgccgcgaa cggatggagacgctggagcgacacgcctcgatgctcgattccctgttcgaggagttgccc gtctccctgtacgtcaaagacgaggcggggagacacctccgcaagtcggtctccgaccgg gtgacggagttcccggacgacgaggagtggtaccgcggcaagaccgacctcgacatctac gacgaggagctggcccgacagacctacgccgacgacatgcaggtcatcgagtcgggcgaa ccgatcatcgggaaagaggagtacaatcccgtggcagaggagtgggtggtctcctccaaa gtgccctggcgaggacccgacggcgaggtgtgtgggctgatcggcgtcacgcagtacgtc accgagcgaaaggaacacgaacggaagctggaggcgatcgtccagaacacgaccaaccag atatacatcaaggactcggacggcgtctaccagttcgtcaacgaggcgactgcggagctg ttcgaccgcgagccggcggagattctggggaagcgagacgacgaactcttcgacagcggg accaccgaggcgctcatttcggaggaccgcaacgtcctgtcgtcgggcgaaaccgtgacg acgacgacgacggcggagatcgacggcgagcgccggtccttcctcgacaacaagtacccg taccgagacgagtcgggcgagatcatcggcgtcatggggatcagcaaggacatcaccgag cgacaggcacgcgaacgaaagctgcgtgagcgcaagcgcgagctcgcgaccctgatgagc aacctcccggggatggtgtatcgctgtcgaaacgaacccgactggcccttcgagttcgtc agcgacgggtgccgggagctgacggggtacgagccagcggcgatccggagcggggcggtc aactgggccgaagacatcatcgtcggcgacaacgacgagctgtgggagacggtccagcgc gctgtcgacgaacacgaacagttcgaggtcacctatccgatcgagaccgccgacgggcag cgtcggtggctgtgggaacgcggcgtcggtatctacgacgacgacgggaccgtccgagcc ctggagggcgtcgtcaccgacgtgaccgatcgcaaggcacgcgagcgcgagcttcgccgg accaacgagcggctcaacacgctcatcgacgcctcgcccgacgccctcattctgaccgac ccggacggcgtcgtcgagctgtggaaccccgccgccgagcgcatcttcggctggagcgag tcggaggtcgtcggcgacacgctgccgttcgtcccggccgacagggagtccgagttcgac gcgttccgcgagcggctgctgtccggcgagtcgatcagcagcgtcgagacgcgacgacgc cgcacggacggcacactgatcgacgtgagcctctcggcggccccgctgcgagacgtcgac ggcgagatcaccgggatcatggccgtcatggaggacatcacggagcgcaagtgccaggag cgccagctccgggaacaccagcgcgaactcgaccgctaccgggagttcaccgaagacatc ctcgacgccgtcgacgacgtgttctacgtcctcgacgaggacggctccctccagcgctgg aacagcgcacacacgcaggtgacgggctactcggacgcggagatcgaatcgatgcacgcg acggacttcttcgcgcccgaacaccgcagcgagatcgaggcggcgatcgaagagacgaaa gcgaccggtgacgcggtggtcgaggttccctacctgaccaaagacggcgagcaggtccca cacgagttcgtcgccgtcgctctcgaagacccggacgggaaccagctcgtcgcgggaatc gggcgagacatcagcgagcgaaagcgccgggagcgccagctcgaacgcacgacggacctg ctttcgcgagccgaagagatggcggcgatcggcggctgggcggcggtcgtcgaggacggc gcggccgtcgacaccacgtggaccgacaaactgttcgacatcttcgggctggccgacgac gaggcccgctcggtggaggcgatgccccagttctaccaccccgacgatcgggagcgacac cgcgacgccatcgagcgcgcgctcgaccacgggatcgggtgggagcaggaactgcgactc gacactcccgacggcacccagcggtgggtccacaccatcggagagccggttctcgaagac ggcactgtcgtcgagatcaggggctcggtccaggacatcaccgcacagaagcaacgcgaa ctcgcgctggagtcgctccacgactcggcgcgcgggctgttgacgacggagtcgatcgac gacgccacccggttgatcgtcgacacggccgcatcgctgctcgaccaggcagcggtcggg atctacctgtacgacgagacgacgaacctgctcgaacccgcctcggtgtctccgggcttc gaagcgctctgtggcggcgagccggatgccgtcgggccggggacggagtcgttcctctgg cacgcctacgtcaccgggacccagagcgtcctcgaaggcgtcgacaccagcggcgagtcg ggccttttcgtcgacgcggtcgacaccggcatcgtggtgccgatcgggagccacggcgtc ttcgccgcactcgacgaggccggcgagatcggtgagagagatcgttccctcgtcgagacg ctggtcgcgaccgcggcggccgccttcgagcgactcgaaagcgaggccacgctgcgcgag cgcgaggccgagatcgaggcccagaacgagcggctcagacgccagatccgggccaacgag acgatccgctccgtcgatcagaccctcatcggtgcgaccgatcgagaccagctcgaagcg gcggtgtgcgagcggctggtcgacgacgaggacatctccttcgcctggatcgggtcgttc gattccggcggcgagacgctccaggcccgtgcgtgggccggtgagggcgagtcgtatctg gacacgccctcgttcgaccgctcggcgacgcactccgacccggccgtctcggcggcggtg gacgacgagccggtcgcggtctcgaacatcgcccagaacgtccagcaggcggcgtggcga cgagcggcactcgccgtgggtcaccagtcggcgctcgcggtccccgtctcgctcgacgac taccagtacggcgtgctggcggtgtacgccgacgagccggacgtgttcggcgagttcgag acagccgtgttcgcggagctggggacgagcatcgccaacgcgatcacgagcatcacgacc cggcaggcgctcaacgccgacacgctgaccgcgctcgaactgtgcgtcgaggacacgacg gacccgctgctcgacatcgcgttcgagagcggctgtacggtcacttacgagggcgtgggt accgtttcgtccgacgagactcgactgttcgtccgggtgagtggctgtgctcccgcgacc gtctcggagctgctcgccgatcggcatacgatcgccgaccaccacctcgtctccgagagc gaggacggcggcgtgttcgaggtgacgatccggggcgagacggtcctcgctcgactcgcc cggcagggcgggcgagtgcgaaagatcgccgccgaggggtccggcatcgacatcgaggtc gacgtgccgacctcggtggacgtgcgctcgttcgtcgagacgctcaccgacgacggcacg gtcgaactggtcagccgacgcgaacgcgcacgctctccggagtccgaccccgcgctcgcc gagtcgatcctgggggcgttgacggaccgccagcgggaggttctccggacgggctacttc tcggggttcttcaactggccgcgcgacacgaccggccaggaactcgcggcgatgctcgac gtgtcccagccgaccgtcaaccgccacctccgactgggccaacagcgagtcatgcgacgg ctgttcgacgacgagcccgaagcggagtga

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