KEGG   Halomicrobium mukohataei JP60: E5139_04220
Entry
E5139_04220       CDS       T05947                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
halz  Halomicrobium mukohataei JP60
Pathway
halz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:halz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    E5139_04220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:halz03400]
    E5139_04220
Enzymes [BR:halz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     E5139_04220
DNA repair and recombination proteins [BR:halz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     E5139_04220
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: QCD64879
UniProt: A0A4D6KD53
LinkDB
Position
complement(840715..841545)
AA seq 276 aa
MRVGAHTSIAGGAYNAVDEQVDYGGNCGQIFSHSPQVWQDPNIEDEEAEQFRERSDEHGV
GPWVIHSSYLVNLCTPKDDLRAKSIDSMQKEVDAADTLGVEYVNVHLGAHTGAGVEGGLD
NAASALDELTIPDGVTVLVESDAGSGTKLGGEFEHLAEVLDRSEQDLEVCVDTAHAFAAG
YDISTADGVAETIAEFDDVVGLDNLACIHLNDSKHECGTNKDEHAHLGEGYIGEEGMAAL
LTHEALEDVPFVLETPTEDGRGFEWNIERARELGNA
NT seq 831 nt   +upstreamnt  +downstreamnt
atgcgcgtcggagcacacacctcgatcgccggcggagcgtacaacgccgtcgacgaacag
gtcgactacggtgggaactgcggccagatcttcagccactcgccacaggtctggcaggac
ccgaacatcgaggacgaggaggccgaacagttccgcgaacgcagcgacgaacacggcgtc
ggcccgtgggtcatccactcgtcgtacctcgtcaacctctgtacccccaaagacgacctc
cgggcgaagtcgatcgactcgatgcaaaaggaggtcgacgccgccgacacactcggcgtc
gagtacgtcaacgtccacctcggtgcgcacacgggagccggtgtcgagggcggtctcgac
aacgccgcgagcgcgctggacgaactgacgattcccgacggcgtcacggtgctcgtcgag
tccgacgccggcagcgggacgaaactcggcggcgagttcgaacacctcgccgaggtgctc
gaccgctccgagcaggacctcgaagtctgtgtcgacacggcccacgccttcgcggcgggc
tacgacatctcgacggccgacggcgtcgccgagactatcgccgagttcgacgacgtggtc
ggactcgacaacctcgcttgcatccacctcaacgactcgaaacacgagtgtggcaccaac
aaggacgaacacgcccacctcggcgaggggtacatcggcgaggaggggatggccgcgctg
ttgacccacgaagccctcgaagacgttcccttcgttctggagaccccgaccgaggacggc
cggggcttcgagtggaacatcgaacgcgccagagagctggggaacgcctga

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