Halomicrobium mukohataei JP60: E5139_05685
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Entry
E5139_05685 CDS
T05947
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
halz
Halomicrobium mukohataei JP60
Pathway
halz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
halz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E5139_05685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
halz03021
]
E5139_05685
Enzymes [BR:
halz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E5139_05685
Transcription machinery [BR:
halz03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
E5139_05685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
FYDLN_acid
HTH_20
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QCD65157
UniProt:
A0A4D6KAT8
LinkDB
All DBs
Position
complement(1126191..1129109)
Genome browser
AA seq
972 aa
AA seq
DB search
MSAQQTPKSISSISFGLMDPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGL
ECKTCGKHSGSCNGHFGHIELAAPVIHVGFNKLIRRLLRGTCRECSRLCLDEREREEFED
RLERSEELGKDVNDVTKAAIRQARKKDRCPFCGEPQYDIKHEKPTTYYEVQDVLSSEYSQ
RIVAAMEPDEEAGRERTTPSELADETGIDPSRVQEIISGEFRPRQDDRRAIESALDVDLT
EEDENKLMPSDIRDWFEDIPDEDVEVLGMKPARSRPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFMDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPDRVAKEMT
QTMNVNERNLDNARRYVANGPEAHPGANYVKRPDGRRLKVTEKNCEELAEKVEPGWEVSR
HMIDGDIIIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHTNPEFNETQALDLLRATR
IDELPPESGVDDDGTPYWTGRDIFSELLPDDLDLTFTSEAGDDVIIEDGQLVEGTIDDSA
VGGFGGEIVDTITKEYSNTRARIFINEIAALAMRSIMHFGFSIGIDDESVPEAAEAQITE
AIDNAYDRVEELIETYDRGELESLPGRTVDETLEMKIMQTLGKARDSAGDIAGDHFDDDN
PAVVMAESGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHFKQNDLSSDAHGFVE
ASYRSGLNPKEFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELEAQYDGTVRDTSD
NIVQFEFGEDGTSPVQVSSNEETPVDVEEIADSVLDAEFESESIKSEFLGERTEPTNLSE
HTDDWWMAEGDD
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcacaacagacacccaaatcgatcagttccattagcttcgggctgatggatccc
gaggagtaccgcgacatgagcgccacgaaggtcatcacggccgacacctacgacgacgac
gggttcccgatcgacatgggactgatggacccgcgtctgggcgtgatcgaccccggcctg
gagtgtaagacctgtggcaagcacagtgggtcgtgtaacggccacttcggccacatcgaa
ctcgcagcgcccgtcatccacgtcgggttcaacaagctcatccgacgcctgctgcgcggg
acctgtcgggagtgctcgcggctctgtctcgacgaacgcgaacgcgaggagttcgaggac
cgcctcgaacgatccgaggagctgggcaaggacgtcaacgacgtgaccaaggccgcgatc
cggcaggcccgcaagaaggaccgctgtccgttctgtggcgagccccagtacgacatcaaa
cacgagaagccgacgacctactacgaggtccaggacgtgctctcctcggagtactcccag
cggatcgtcgccgcgatggagcccgacgaggaggccggccgcgaacggaccacgccctcg
gaactggccgacgagacgggtatcgatccctctcgcgtccaggagatcatctccggagag
ttccgaccccgacaggacgaccgtcgggccatcgagtcggcgctggacgtggacctcacc
gaggaagacgagaacaagctgatgcccagcgacatccgggactggttcgaggacatcccg
gacgaggacgtcgaggtgctgggcatgaagcccgcccgttctcgccccgagtggatgatt
ctcaccgtcctgcccgtgccgccggtcaccgcgcgaccgtcgatcacgctggacaacggc
cagcgctcggaggacgacctgacccacaagctggtcgacatcatccggatcaaccagcgg
ttcatggagaaccgcgaggcaggcgcgccccagctgatcatcgaggacctctgggaactg
ctgcagtaccacgtcaccacgttcatggacaacgagatcagcggcacgccgccggcccga
caccgctctggccggccgctgaagaccctctctcagcgcctgaaaggcaaggaaggtcgc
ttccgtggctcgctgtccgggaagcgcgtgaacttctcggcccggacggtcatctccccg
gacccgaccctgtcgctcaacgaggtcggcgtccccgaccgcgtggccaaggagatgacc
cagacgatgaacgtcaacgagcgcaacctcgacaacgctcgtcgctacgtcgccaacggg
cccgaggcccaccccggtgccaactacgtcaagcggcccgacggtcgccgactgaaggtc
accgagaagaactgcgaggagttggccgagaaggtcgaaccgggctgggaagtgtcccgt
cacatgatcgacggcgacatcatcatcttcaaccgccagccgtcgctgcaccggatgtcc
atcatggcccacgaggtcgtggtgatgccctacaagacgttccggctcaacacgacggtc
tgtccgccgtacaacgcggacttcgacggcgacgagatgaacatgcacgccctccagaac
gaggaggcccgtgccgaggctcgcgtgctgatgcgcgtccaggagcagatcctcagcccg
cgcttcggtgagaacatcatcggcgcgattcaggaccacatcagtgggacctatctgctg
actcacactaatccggagttcaacgagacccaggcactggacctgctgcgtgcgacccgg
atcgacgagctcccgcccgaatccggcgtcgacgacgacggcacgccctactggacgggt
cgcgacatcttctcggagctgttgcccgacgacctcgatctgacgttcaccagcgaggcc
ggcgacgacgtgatcatcgaggacgggcagctcgtcgaggggaccatcgacgacagcgcg
gtcggtgggttcggcggcgagatcgtcgacactatcaccaaggagtactccaacacccga
gcgcgcatcttcatcaacgagatcgccgcgctggcgatgcgttcgatcatgcacttcggg
ttctcgatcgggatcgacgacgagtccgttcccgaggccgcggaggcccagatcaccgag
gccatcgacaacgcctacgaccgcgtcgaggaactcatcgagacctacgatcggggcgaa
ctggagtcgctgcccggtcggacggtcgacgagaccctcgaaatgaagatcatgcagacg
ctcggcaaggcccgtgactccgccggtgacatcgccggagaccacttcgacgacgacaac
ccggctgtcgtgatggccgagtccggcgcgcgtgggtcgatgctcaacctgacccagatg
gccggctgtgtcggccagcaggcggtccgtggcgagcggatcaaccgcggctacgaggac
cgcaccctgtcacacttcaagcagaacgacctctcctcggacgcccacggcttcgtggag
gcgtcgtaccgctccggactcaaccccaaggagttcttcttccacgcgatgggtggccgc
gaggggctggtcgacacggcggtccggacctccaagtccggttacctccagcgccgtctg
atcaacgcgctctcggaactggaggcccagtacgacggcaccgtccgggacacctcggac
aacatcgtccagttcgagttcggcgaagacggcacctcgccggtacaggtctcctcgaac
gaggagacgccggtcgacgtcgaggagatcgcggacagcgttctcgacgccgagttcgag
tccgagagcatcaaaagcgagttcctcggtgaacgcaccgagccgaccaatctgtcggaa
cacaccgacgactggtggatggcggagggtgacgactga
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