Halomicrobium mukohataei JP60: E5139_05920
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Entry
E5139_05920 CDS
T05947
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
halz
Halomicrobium mukohataei JP60
Pathway
halz03420
Nucleotide excision repair
halz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
halz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E5139_05920
03430 Mismatch repair
E5139_05920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
halz03400
]
E5139_05920
Enzymes [BR:
halz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5139_05920
DNA repair and recombination proteins [BR:
halz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E5139_05920
MMR (mismatch excision repair)
Other MMR factors
E5139_05920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
DEAD
AAA_22
AAA_11
Herpes_ori_bp
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QCD65200
UniProt:
A0A4D6KB06
LinkDB
All DBs
Position
complement(1169673..1171514)
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AA seq
613 aa
AA seq
DB search
MTDTSPQVVRLFGGPGSGKTTALLDRVEELLSEDDADVRDILVVSYTRAAAAEIRERLAE
RLDINPRSLKGNVCTMHAKAYELLDLSRGDVVGESDKEDFCDEFGLEFEDEYEGSRRRSA
RSTTLGNKVIATSQWLQRTRRDVADWYDVPFKWDEEEVRLPPEIDDNAQTGNKYTPTWPG
DDDRLDVPEAIRAWRTYKGDNDLTGFADMLERVKQRSLLPNVEYLIIDEFQDITTLQYDV
YEEWKPRMTKILIAGDDDQVVYAWQGADPDLLLEEDVDVDEVLPNSYRLPSSILNVVNRE
VRHIEKRQEKDLNPRKEGGEVLPMLNPSMLDLVREIRRTVDDDEGTVMILFRARYQMFQF
MDEFIGEGIPFTCLTDQRMWTDRLTEYVRGVEALDADERLSVLEGRRLADMLADSAFGTG
DRDDLFDELDEIADASEKDDLADIEMDPDVIREHAPFAPDPRAAADMLRKVTNFQERTVE
AYFHGEYAGMDADQVRLGTIHSAKGREADHVFVGTDLTEKVVEQMAAQVEQNDRHVPGDE
EFTKHTDPIPTLTDNERRVFYVGMSRARERLVLMENLVDGAPTLPIDVILENEPRPDSPE
ELLIEAQEPLPTP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacgagcccgcaggtggtccggctgttcggtggtccggggagcgggaagacg
acggcgctgctcgaccgcgtcgaagaactgctgtccgaggacgacgccgacgtgcgcgac
atcctggtcgtctcgtacacccgtgcggccgccgccgagatccgcgagcgactggccgaa
cgactcgacatcaacccacgttctctgaaggggaacgtctgtacgatgcacgcgaaggcg
tacgaactgctcgacctctctcggggcgacgtggtcggcgagtccgacaaggaggacttc
tgtgacgagttcgggctggagttcgaagacgagtacgaaggctctcgccgtcggtcggcc
cgctcgacgacgctcgggaacaaggtcatcgccacgagccagtggctccagcgcactcgc
cgagacgttgccgactggtacgacgtgcccttcaagtgggacgaggaggaggtccggctt
ccgcccgagatcgacgacaacgcccagactggcaacaagtacacgccgacctggcccggc
gacgacgaccgactcgacgtgcccgaagcgatccgcgcctggcgcacctacaagggcgac
aacgacctcaccgggttcgcagacatgctcgaacgggtcaagcagcgatcgctgctgccc
aacgtcgagtacctcatcatcgacgagtttcaggacatcaccaccctccagtacgacgtg
tacgaggagtggaaaccccgcatgacgaagattctcatcgcgggcgacgacgaccaggtc
gtctacgcctggcagggtgccgaccccgatctgttgctggaggaagacgtcgacgtcgac
gaggtcctgcccaactcataccgactgccgtcctcgattctcaacgtggtcaaccgcgag
gtgcgccacatcgagaagcgccaggagaaagacctcaacccgcgcaaggagggcggcgag
gtgttgccgatgttgaacccctcgatgctcgatctggtccgcgagatccgccggaccgtc
gacgacgacgagggaaccgtgatgatcctctttcgggcgcggtaccagatgttccagttc
atggacgagttcatcggcgaggggatccccttcacctgcctgaccgaccagcggatgtgg
accgaccggctcaccgagtacgttcgcggcgtcgaggcgctggacgccgacgaacgcctc
tccgtgctagagggtcgccggctcgcggacatgctcgccgactccgctttcgggaccggc
gaccgcgacgacctgttcgacgaactcgacgagatcgcagacgccagcgagaaagacgat
ctggcggacatcgagatggatccggacgtgatccgcgaacacgcaccgttcgcgcccgat
ccgcgggccgccgccgacatgctccggaaggtgaccaacttccaggagcggaccgtcgag
gcctacttccacggggagtacgccggtatggacgccgatcaggtccggctggggacgatt
cactccgccaagggccgcgaggccgaccacgtcttcgtcggcaccgacctcaccgagaag
gtcgtcgagcagatggccgcacaggtcgagcaaaacgaccgccacgtgccgggcgacgag
gagttcaccaagcacaccgatccgatcccgaccctgaccgacaacgaacggcgcgtgttc
tacgtcggcatgagccgcgcccgcgagcgactcgtcctgatggagaacctcgtcgacggt
gcgccgacgctccccatcgacgtgatcctggagaacgagcccaggcccgattcccccgag
gagcttctgatcgaggcgcaggaaccgctgccgacgccctga
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