KEGG   Halomicrobium mukohataei JP60: E5139_06510
Entry
E5139_06510       CDS       T05947                                 
Name
(GenBank) DUF91 domain-containing protein
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
halz  Halomicrobium mukohataei JP60
Brite
KEGG Orthology (KO) [BR:halz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:halz03032]
    E5139_06510
   03400 DNA repair and recombination proteins [BR:halz03400]
    E5139_06510
Enzymes [BR:halz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     E5139_06510
DNA replication proteins [BR:halz03032]
 Prokaryotic type
  DNA Topoisomerases
   E5139_06510
DNA repair and recombination proteins [BR:halz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      E5139_06510
SSDB
Motif
Pfam: zf-C4_Topoisom NucS_N zinc-ribbons_6 Beta_helix_3
Other DBs
NCBI-ProteinID: QCD65304
UniProt: A0A4D6KBK5
LinkDB
Position
complement(1272189..1272956)
AA seq 255 aa
MHDDTRVLAGDCTTLFETTGAQTQRTREQRGEVLVVVKPDNTVLVHDADGYQPVAWLTRP
DSVTIDGGTVVARDGDDLLRVVTHDEHGSASYPVSEAGIPVGDCPACAGTLVRSNGAVRC
SNCAERYGLPADATITGGRCRDCRLPTIRTERGRAFELCLDRECESLDDRVIDAFDREWA
CPECDGDLRIVRKGGLFAGCEHHPDCEAAFAIPTGVVVDTCACGLPLFETAGGRRCLDAT
CSQAQVSEPATYSGP
NT seq 768 nt   +upstreamnt  +downstreamnt
atgcacgacgacactcgcgtgctggccggcgactgtaccacgctgttcgagacgaccggc
gcacagacacagcggacccgcgagcaacgcggcgaggtcctcgtggtggtcaaacccgac
aacaccgttctcgtccacgacgccgacggctaccagccggtcgcgtggctcacgcggccc
gacagcgtcaccatcgatggcgggaccgtggtcgcccgcgacggcgacgacctcctgcgc
gtggtcacccacgacgagcacggcagtgccagctacccggtctcggaggccggtatcccc
gtcggcgactgcccggcgtgtgcgggcacgctggtccggtcgaacggcgcggtccggtgc
tcgaactgtgcggagcgctacggcctccccgcggacgcgacgatcaccggcggtcgctgc
cgggactgtcgcctccccaccatccgcaccgaacggggccgagcgttcgaactgtgtctg
gaccgggagtgtgaatcgctggacgaccgcgtcatcgacgccttcgaccgcgagtgggcg
tgtccggagtgtgacggcgacctccgcatcgtccggaagggcgggctgttcgccggctgc
gagcaccaccccgactgcgaggccgccttcgccatccccacgggtgtggtcgtcgacacc
tgtgcctgcggactcccgctgttcgagaccgccggaggtcgtcgctgtctcgacgcgacg
tgctcgcaggcgcaggtgagcgagccggcgacgtactccggaccctga

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