Halomicrobium mukohataei JP60: E5139_09605
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Entry
E5139_09605 CDS
T05947
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
halz
Halomicrobium mukohataei JP60
Pathway
halz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
halz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
E5139_09605 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
halz03019
]
E5139_09605 (prf1)
03012 Translation factors [BR:
halz03012
]
E5139_09605 (prf1)
Messenger RNA biogenesis [BR:
halz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
E5139_09605 (prf1)
Translation factors [BR:
halz03012
]
Eukaryotic type
Release factors
E5139_09605 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-ProteinID:
QCD65874
UniProt:
A0A4D6KD12
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All DBs
Position
complement(1860939..1862192)
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AA seq
417 aa
AA seq
DB search
MSESEQEQSDKQKYEFKKVIEKLKGYDGSGTQLVTIYVPEDKQISDVVAHVTQEHSEASN
IKSKQTRTNVQDALTSIKDRLRYYGNAPPENGMVLFSGAVDSSGGRTEMVTEVLESPPDP
IESFRYHCDSDFLTEPLDEMLADKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGK
QRKGGQSAQRFARLRLEAIDNFYQEVAEMANDLFVSRRHEMNGILVGGPSPTKDEFLDGD
YLHHELGDNVLGKFDVAYTDESGLYDLVDAASEVLAEHEILQDKEAMEEFFKELHDGDLA
TYGFGPTRENLIMGSVDRLLISEDLRKDVLTYTCENGHDEYEMVDRSASIDDHDCSRCSE
TVPAEEAEREDAIDHLMEIAQQRGTETLFISTDFEKGEQLLSAFGGVAGLLRYSTGV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtccgagcaggagcaatccgacaaacaaaaatacgagttcaagaaagtcatc
gagaagctcaaggggtacgacggatccgggacgcaactggtgacgatctacgtaccagag
gacaagcagatcagcgacgtcgtcgcccacgtcacacaggaacactccgaagcgtccaac
atcaagtcaaagcagacccggaccaacgtccaggacgccctgaccagcatcaaagaccgg
cttcgctactacgggaacgcaccgcccgagaacgggatggtcctgttctccggtgcggtc
gactccagtggtggacgcaccgagatggtcacggaggtcctagagagtccgcccgacccc
atcgagtcgtttcgctaccactgtgattcggatttcctgaccgagccactggacgagatg
ttggccgacaagggactgttcggcctgatcgtcctcgaccggcgcgaggcaaacgtcggc
tggctcaagggcaagcgcgtcgaacccgtcaagtccgcctcgtcgctggtcccgggcaag
cagcggaaaggtggtcagtccgcacagcggttcgcacggctgcgcctggaggccatcgac
aacttctatcaggaggtcgccgagatggccaacgacctgttcgtctcgcgtcgccacgag
atgaacggcatcctcgtgggcggtccctccccgaccaaagacgagttcctcgacggcgac
tacctccaccacgaactcggcgacaacgtcctcgggaagttcgacgtggcctacaccgac
gagtccggactgtacgatctcgtcgacgccgcgagcgaggtgctggccgaacacgagatc
ctccaggacaaggaggccatggaggagttcttcaaggagctccacgacggcgatctggcg
acctacggcttcgggccgacccgcgagaacctcatcatggggtcggtcgaccgcctgctc
atctccgaggacctccggaaggacgtgctcacctacacctgtgagaacggccacgacgag
tacgagatggtcgaccggtcggcgtcgatcgacgaccacgactgctcgcggtgtagcgag
accgtccccgccgaggaggccgaacgcgaggacgcgatcgaccacctcatggagatcgcc
cagcagcgcggcaccgagacgctgttcatctcgacggacttcgagaagggcgaacagctc
ctgtcggccttcggcggcgtcgccggactcctgcgctactcgaccggcgtctaa
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