Halomicrobium mukohataei JP60: E5139_11790
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Entry
E5139_11790 CDS
T05947
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
halz
Halomicrobium mukohataei JP60
Brite
KEGG Orthology (KO) [BR:
halz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
halz03016
]
E5139_11790
Enzymes [BR:
halz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E5139_11790
Transfer RNA biogenesis [BR:
halz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E5139_11790
Prokaryotic type
E5139_11790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QCD66289
UniProt:
A0A4D6KHP5
LinkDB
All DBs
Position
complement(2290842..2291741)
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AA seq
299 aa
AA seq
DB search
MVRDSPEHRSPADLLTFGVVNLDKPPGPSAHQVAAWVRDAVDDALDAAGDDRTLGRVAHG
GTLDPKVTGCLPILLGDAARAARVFDDAVKEYVTILELHDQAPPDFDSIVAEFEGEIYQK
PPRKSAVKRRLRSRTIHALDVLERHDRRALLRVRCGSGTYVRKLCHDIGLALGTGAHMGE
LRRTATGDFDDRDLVTMEDLVDALAEWTDNDDETWLHETVAPAERALAGYPTVTIAPSAA
REVAHGAPVYAPGVIETDAEQGADVCCVTPDGAAVCLGRLVGDPDADSGVAVELERVLV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcgactcgcccgaacaccggtcgcccgccgatctgctcaccttcggcgtcgtc
aacctcgacaagccacccggcccctccgcccaccaggtggccgcctgggtccgggacgcc
gtcgacgacgcgctcgacgcggccggcgacgaccggacgctcgggcgcgtcgcacacggc
ggaacgctcgacccgaaggtcacgggctgtctcccgatcttgctcggcgacgccgcccgc
gcggcacgcgtgttcgacgacgcagtcaaagagtacgtcacgattctcgaactccacgac
caggccccgccggacttcgactcgatcgtcgccgagttcgagggcgaaatctaccagaag
cccccgcgcaagagcgccgtgaaacgacggctccgcagccggacgatccacgcgctagac
gtcctcgaacgccacgatcgccgggcgctcctgcgcgtccgctgtggctctggaacgtac
gtccgaaagctctgtcacgacatcgggctcgcgctcgggaccggcgcacacatgggcgaa
ctccgacgcaccgcgaccggcgacttcgacgatcgcgacctcgtcaccatggaggacctc
gtcgacgcactggccgagtggaccgacaacgacgacgagacgtggctccacgagaccgtc
gcacccgcggaacgcgccctggccggctatcccacggtgaccatcgcacccagcgccgcc
cgcgaagtggcacacggcgcaccggtctacgcacccggcgtgatcgagaccgacgccgag
cagggtgccgacgtgtgctgcgtgacacccgacggcgcggcggtgtgtctgggcagactg
gtcggcgaccccgacgccgacagcggcgtcgccgtcgaactcgaacgcgtcctcgtctaa
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