Halomonas sp. R57-5: HALO0059
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Entry
HALO0059 CDS
T04029
Name
(GenBank) DNA helicase, UvrD/REP type
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03420
Nucleotide excision repair
ham03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HALO0059
03430 Mismatch repair
HALO0059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO0059
Enzymes [BR:
ham01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HALO0059
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HALO0059
MMR (mismatch excision repair)
Other MMR factors
HALO0059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CEP33741
UniProt:
A0A0D6E1X2
LinkDB
All DBs
Position
I:complement(54221..56419)
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AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNSAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAKEMRTRLEALLSISMRHVWVGTFHSIAHRLLRTHWQDAKLPQHFQIIDSDDQ
LRLVKRLLKDYSIDDERYPPRQVQHFISGCKEEGLRPHQVNVDGDAYMGQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDNPALLKHYQERFGHVLVDEFQDTNTLQYAWLKLLTGM
QTPMTAVGDDDQSIYGWRGAKVENISRFEQEFPQTHTVRLEQNYRSTSAILEAANTLISH
NSERMGKNLWTDGIEGEPISIYAGFNDLEEARYIVDTIKEKVDEGFNRRDVAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLMLNRDDDASLERVINVPTRGIG
TRTVEIVRLRAREQGIQLWQALHDSINDGTLKGRAANAVQTFANLIEQLDNDASGMALHE
IIDHVTVHTGLIEHHKSERGEKGQARVENLEELVTAARAFTQGDVFEAPEAGEGMAALEA
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSLEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRTSFAQQSVESDGDIPSLHVGQGVEHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLTPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgattctcgatcagctcaactccgcccagcgcgaagcagtgagc
gcccctcaaggtaatctgttggtgctcgcaggcgcaggctccggtaaaacccgcgtgctg
gtgcatcgcatcgcctggctgatgcaggccgaagggttgtctccctacgctctgctggcg
gttacctttaccaacaaagccgccaaagagatgcgcacccgccttgaggcactgcttagc
atctcgatgcgccatgtgtgggtaggcacctttcactccatcgcccaccgcctgctgcgc
acccactggcaggatgccaagctgccgcaacacttccagattatcgattctgacgatcag
ctacgcctggtcaaacggctgctgaaagattactccatcgacgacgaacgctacccgccg
cgccaagtgcagcactttatttccggctgtaaagaagagggactgcgtccgcatcaggtc
aatgtggatggcgatgcctacatgggccagatggtcgagctctacgaacgctaccagctc
acctgcgagcggggcggactggtcgatttcggcgagctgctgttgagaagcctggagcta
ctgcgcgataaccccgcgctgctgaaacactatcaggagcgctttggtcacgtactggtg
gatgagtttcaggataccaacaccctgcagtatgcatggctaaaactgctgaccggcatg
cagacgccgatgacggcagtaggcgatgatgaccagtcgatctacggctggcgcggcgcc
aaagtggagaatatcagccgctttgagcaggagtttccgcaaacccataccgtgcggctt
gagcagaactatcgctccaccagcgcgattcttgaagctgccaatacgctgatcagccac
aacagcgagcggatgggtaaaaacctctggaccgacggcatcgaaggcgaaccgatctcg
atttacgccgggtttaacgacctggaagaagcgcgctatatcgtcgataccatcaaggag
aaggtcgacgaaggcttcaaccgccgcgatgtcgccattctctaccgctccaacgcccaa
tcgcggctgctggaagagacgctgattcgccaaggcatgccttaccgtatttacggcggt
caccgcttttatgagcgcctggaaatcaaaaatgccctggcctatctacgcctgatgctt
aaccgcgatgacgacgcctcgctagaacgggtgattaacgtgcccacccgcggcatcggc
acccgcaccgtggagattgtccgcctgcgcgcccgtgaacaaggcattcagctgtggcag
gcgctccacgattcaattaacgacggcaccttgaaaggccgagcggccaatgcagtgcaa
accttcgccaacctgattgagcagctcgataacgatgcttccggcatggcgctgcacgag
attatcgatcacgtcacggttcataccggtttgatcgaacatcacaagagtgagcgcggc
gagaaaggccaggcgcgggtcgaaaacttggaagagctcgtcactgctgcccgcgccttt
acccaaggcgacgtttttgaagcccctgaagcgggcgaaggcatggccgcactggaagcg
tttctctcagaagccgcgcttaatgctggcgaccatgaagccgaagagtttgaggacagc
gtacagctgatgacgctgcactccgccaaaggcctggaattccccgtggtgtttattgcc
ggtgtcgaagaggggctgtttccgcataagatgtcccttgaggaaccgggcaggctcgaa
gaggaacgcagactgtgttacgtcggtgtcacccgcgccatgcagaagctctacctgacc
cacgccgaaacccgccgcctacacggcaaagaggtgtttccacgcccctcgcgctttctg
cgcgagctgcccccgcacctgctggaagaagtccgcctgcgcgggcatatttcccgcccg
gtgacggcatcgcgcacttcctttgctcagcaaagcgtcgaaagcgacggcgacataccc
agcctgcacgtcggccagggggttgagcacccggtattcggcgaagggattatccttaac
gcggaaggcgaaggcgcgcgtgcccgggttcaggtcagctttgaaggcgaaggcgtcaaa
tggctagtcctcggctttgccaagttgacgccgctttaa
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