Halomonas sp. R57-5: HALO0060
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Entry
HALO0060 CDS
T04029
Name
(GenBank) Winged helix-turn-helix transcription repressor, DNA-binding
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ham03000
]
HALO0060
Transcription factors [BR:
ham03000
]
Prokaryotic type
Helix-turn-helix
Other families
HALO0060
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GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
MamL-1
Motif
Other DBs
NCBI-ProteinID:
CEP33742
UniProt:
A0A0D6E2L2
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Position
I:complement(56677..57528)
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AA seq
283 aa
AA seq
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MSRALFDEMRRRMEHFRRSEQKVARFVLRNPEEVIHMRIVDLATEATVSEPTVVRFCRAL
GCNGFQDFKLQLAQMLASGSQFAQFSMNDSDSVAEXSHSIFDSTVGTLLSVRDRLDNDAL
GRAVNALAMANRVEFYGFGASGAVAFDAQHKFFRLQISTSAYADPHMQNMSAVTLNDGDV
VVAISQTGRTKALVASVRLAREAGATVIGLCPSGSPLAEEVSLPLYIDVHEDTEIYTPLS
SRIAHLVLIDVLAVGVAKTRGPKLAEQLKAVKKSLNTLRFPEE
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcgcgccctgttcgatgaaatgagacgccgcatggagcactttcgacgctccgag
caaaaagtggcgcggtttgtactgcgcaacccagaagaggttatccacatgcgtattgtg
gatttagccaccgaagccaccgtgagcgaacccaccgtggtgcgcttttgccgtgcactg
gggtgcaatggctttcaggacttcaagttacagctggcgcaaatgctggccagcggcagt
cagttcgcgcagttttccatgaatgatagcgactcggtcgctgagktttcccacagtatt
tttgactcgaccgtgggcacgctgctctcagtgcgcgaccggcttgataacgacgccctg
ggccgtgcagttaacgccctggcgatggccaaccgggtcgagttctatggctttggggct
tccggtgccgtggcctttgatgcccagcacaagtttttccgcctgcagatctccacttct
gcctacgccgacccacatatgcagaatatgtcggcagtgacgttgaatgatggcgacgtg
gtggtggcaatttcacaaacaggccgtaccaaagcgttagtcgccagtgtgcgcctggct
cgtgaagcgggcgcgacagtcattggcctgtgccccagcggctcgccgctcgccgaagag
gttagcctgccgctgtatatcgatgtccatgaagacaccgagatttacaccccgcttagc
tcgcggattgcccatctagtgttgattgacgtacttgccgtcggcgtggccaaaacccgc
gggccgaaactcgccgaacagctcaaagcggttaaaaagagccttaatacgctgcgcttt
cctgaagaataa
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