Halomonas sp. R57-5: HALO0256
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Entry
HALO0256 CDS
T04029
Name
(GenBank) Exodeoxyribonuclease 7 small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALO0256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO0256
Enzymes [BR:
ham01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HALO0256
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HALO0256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
KxDL
CCDC186_N
SHOCT-like_DUF2089-C
Sigma70_ner
YgzA
DUF4164
Motif
Other DBs
NCBI-ProteinID:
CEP33938
LinkDB
All DBs
Position
I:complement(259439..259729)
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AA seq
96 aa
AA seq
DB search
MSDTTPPPQDFAATVEQLESIVERLESGELSLEDALTAFEQGVRLTRDAQQRLDSAELKV
RALSEDSEGRLNVAPFAGPDDPKDAAEDESKETPPW
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacgacaccacccccgcaggactttgccgcgacggttgagcaacttgaatcc
atcgttgaacgtcttgagtcaggcgagctctcattggaagatgcactgaccgcgtttgaa
cagggcgtgcggctaacccgcgatgcccagcagcgtctggatagcgccgaacttaaggtg
cgggcgctgagtgaagacagcgaagggcgtttaaatgtagcgcccttcgctggccccgac
gaccccaaggatgcggccgaggatgaaagcaaggagacgcccccatggtag
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