Halomonas sp. R57-5: HALO0675
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Entry
HALO0675 CDS
T04029
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO0675
Enzymes [BR:
ham01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HALO0675
DNA repair and recombination proteins [BR:
ham03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HALO0675
Prokaryotic type
HALO0675
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CEP34357
UniProt:
A0A0D6E4C5
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Position
I:complement(719622..721202)
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AA seq
526 aa
AA seq
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MAKAPIQVVWFKRDLRIHDHVPLASAAMAGPVLPVFAIEPGQWQAPDSALRHWQFAADSL
VDLSHALETLGLPLCIWQGDIIDLLDALKTHYGEFALHSHEETGNAWSFARDKSVKAWCQ
QHGAPWHEARQHGVIRGLKSRVAERDAWEKQWEALMTAPXFSAPQNARAAEGWQAFHHID
IEQLHKLTLGFDTTPCPERQPGGRSEGRAVWRSFVSQRGRRYRGSLSKPLLAWEFGSRLS
PHLSWGTLSMREVVQSLRRQRKKHAEDAAWSRSLRAFASRLHWHCHFIQKLESEPSIESQ
TLHPALRGLRERDPEXPNLIAWKRGQTGVPLVDACMRSLIATGWINFRMRAMLISYATFG
LGLHWVEPALHLARLFTDFEPGIHYPQVQMQAGATGTNALRVYNPIKQAEDNDPDGEFVA
RWVPELTALPLEXRAKPWALPESLRQRFGFQPGEHYPLPNDFEAEARHWKKTLYELRRTP
EARDASQAIVDRLASQRRPPAQRAKKAKPANRQQLSLFXEGGLEDG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggcacctatccaggttgtttggttcaaacgcgatttacgtattcatgatcat
gtgccgcttgccagcgccgccatggctggcccagtgttgcccgtctttgcgattgaaccc
ggccagtggcaagcgccggatagtgccctgcgccactggcagtttgccgctgactcactt
gtcgatctttctcacgctctggagacacttggcctaccgctgtgtatttggcagggcgat
attatcgatttgcttgatgccctgaaaacccattacggcgagtttgctcttcactctcat
gaagagaccggcaacgcctggagctttgcccgtgataaaagcgtcaaggcatggtgccaa
cagcacggcgcgccatggcatgaagcacgccagcacggcgtaatacgcggcctaaaatcc
cgggtggcagagcgcgatgcatgggaaaaacagtgggaagcgttaatgaccgctcctmcc
ttctcagccccgcaaaacgctcgagcggccgagggctggcaagcttttcatcatattgat
attgagcagcttcataaattaacgctagggtttgataccacgccctgcccggagcgccag
cctggtggccgcagcgaaggccgcgcagtgtggcgcagctttgtaagccagcgcgggcgg
cgctatcgcggctcactgtctaaaccactactggcctgggagtttggctcgcggctttcg
ccccatttgtcttggggcacgctctccatgcgcgaagtggtgcagtcgctgcgccgtcaa
cgaaaaaagcatgctgaagacgccgcttggtcgcgctcgctgcgcgccttcgcctcccgg
cttcactggcactgccactttattcaaaagctcgaaagtgagccgagcattgagtcacaa
accctccacccggcgttgcgcggcctgcgggagcgcgaccctgaacmccccaatctgatc
gcctggaagcgtggccaaaccggcgtgccgttagtggatgcctgtatgcgcagcctgatc
gccaccggttggatcaactttcgtatgcgcgcgatgctgatttcctacgccacttttggc
cttgggctgcactgggttgagccagcattgcatttggcgcggttgtttaccgattttgag
cccggtattcactaccctcaggtgcagatgcaggcaggcgccacgggcaccaacgcgctg
cgagtgtataaccccatcaaacaggcggaagataacgacccagatggtgagtttgtcgcc
cgctgggtgccggaattaaccgccctgccgttagagkggcgcgccaagccgtgggcacta
cccgaaagcctacgccagcggttcggctttcagcccggcgaacactatccactgcccaac
gactttgaggcagaagcacggcactggaagaagacgctttatgagttgcgtcgcacgcca
gaggcccgagacgccagccaagcgattgtggataggctcgccagccagagacggccaccc
gctcagcgcgctaaaaaagcaaagcccgctaaccggcagcagctttcgctgtttgrtgag
ggagggttggaggatgggtag
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