Halomonas sp. R57-5: HALO0870
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Entry
HALO0870 CDS
T04029
Name
(GenBank) ABC transporter periplasmic protein
KO
K10117
raffinose/stachyose/melibiose transport system substrate-binding protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HALO0870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO0870
Transporters [BR:
ham02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Raffinose/stachyose/melibiose transporter
HALO0870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_11
CDL
Motif
Other DBs
NCBI-ProteinID:
CEP34552
LinkDB
All DBs
Position
I:936548..937837
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AA seq
429 aa
AA seq
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MQVANNDNVSCSRPRSLALAIAVTAALSSGAAAAETTVTVLRIESSSAEKDYYNEVVAEF
ESQHPEVNVEFEYLANEAYKTRLPTMLQSSQRPDIYYTWGGEGLRDQVDAGFVRDLTEPM
RDGWQDIYPESAVRAFTLDDRVYGAPLYATVVGIWANTALTEQAGVDVEAIKTWADFENA
VVALREEGITPLVVGGQDGWPLHFYWGSLVTRLAGGEGIEAAKSGDNGGFNGEPFVRAGE
MLQSLVELDPFQSGFMATSYERASGMFGDGEAAFHVMGDWDYLPSKQRSVSGEGVPDDDL
QFIPFPEVEGGEGNAQSFGGMNGFAVTRDAPDEAVQFLRFLLNAENQRKAAATGIFVPVA
EGSAEALETPYARRVAEILDESEFHQVFLDQALGTSVGATINDISGDLAQDVITPEEAAA
QVDEAWQFR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtagctaacaatgacaacgtgtcctgttcacgtccgcgttccttagcgctagcc
attgccgttactgctgctttgagttcaggcgcagcggcggctgagaccacggtgacagta
ttaagaattgagagcagcagcgctgaaaaggactactacaacgaagtggttgccgagttc
gagtcgcagcaccctgaggttaatgtcgagtttgaatatcttgccaacgaggcctataaa
acgcgcctgcccaccatgctgcagtccagccagcgcccggatatctattacacctggggc
ggcgaagggctgcgcgatcaggtggatgcggggtttgtccgcgacttaaccgagccgatg
cgcgatggctggcaggatatttaccctgagtccgcagtgcgcgcctttaccctggatgat
cgtgtctatggcgcgccgctctacgccacagtggtgggtatctgggcgaacaccgcgcta
acggagcaagcgggggtcgatgtagaagcgattaagacctgggcggattttgaaaacgcc
gtggtggcgctgcgggaagagggcataaccccgctggtggtcggtggtcaggatggctgg
ccgctgcacttctattggggctctttagtcacccgcctagccggtggcgagggcatcgaa
gcggccaaaagcggtgacaacggtggctttaacggcgaaccctttgtacgtgctggtgaa
atgctgcagtcgttggttgagcttgacccttttcagtccggctttatggccacttcctac
gagcgtgccagcggcatgtttggcgatggcgaggccgccttccacgtaatgggcgactgg
gattatcttccttccaagcagcgctcagtcagtggtgagggtgtaccggatgacgacttg
cagtttattccttttccagaggtcgaaggtggagagggcaacgcacagagttttggcggc
atgaacggttttgcagtcacccgcgacgcgcccgacgaagcggttcaattcctgcgcttt
ttactcaatgcggagaaccagcgtaaagcggcggcgacggggatctttgtgccggtcgcc
gagggctcggccgaagcgcttgaaactccttatgcccgccgggttgcagaaattcttgat
gagtccgagttccatcaagtgttcctggatcaagcgctgggcacctccgttggtgcgacc
atcaatgacattagtggcgatctggcccaagacgttatcactccggaagaggccgccgcc
caagttgatgaagcctggcagtttagatga
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