Halomonas sp. R57-5: HALO0965
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Entry
HALO0965 CDS
T04029
Name
(GenBank) Repair protein radA homolog
KO
K04485
DNA repair protein RadA/Sms
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO0965
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HALO0965
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
Lon_C
DnaB_C
AAA_16
AAA
AAA_22
AAA_14
AAA_5
SLFN-g3_helicase
nSTAND3
AAA_24
Zeta_toxin
NTPase_1
ABC_tran
RecA
GvpD_P-loop
Viral_helicase1
AAA_30
AAA_29
KdpD
cobW
T2SSE
Motif
Other DBs
NCBI-ProteinID:
CEP34647
UniProt:
A0A0D6E573
LinkDB
All DBs
Position
I:1053487..1054863
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AA seq
458 aa
AA seq
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MAVAKAKSAFVCTECGAEYRKWQGQXSSCQEWNTLSEVHLASARPGGGATPGRSGYAGDL
SREVIDLGNVDLSEVPRMSSTFAEFDRVLGGGLVPGSAVLLGGNPGAGKSTLLLQTACKL
AQQRRILYVTGEESLSQVAMRAHRLQLPTNGLKMLAETSVETILAVAEREKPEILVIDSI
QTMHLEDIASAPGGVAQVRESAAALTRFAKKTNTVLLLVGHVTKDGSLAGPKVLEHMIDA
SLLLEGGADSRFRTLRGQKNRFGAVNELGVFAMLEQGLKEVKNPSAIFLSRQEEQAPGSL
VMVVWEGTRPILVEVQALVDESALGNPRRVAVGVDQNRLAMLLAVLNRHGGLFTGDQDVF
LNVVGGVKVLETSADLAVLLAVVSSLQNRALPKELVVFGEVGLSGEIRPVPSGQERIAEA
AKHGFLRAIVPRANAPKQPPKGMEVIAVDKLSDALDAL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggctaaagccaaaagcgcctttgtatgcaccgagtgcggcgccgaataccgt
aaatggcaggggcagkgcagcagttgccaagagtggaacaccctcagcgaagttcatttg
gcaagcgcccgccccggtgggggtgcaacccccggccgatctggctacgcgggtgatctg
tcgcgcgaagtgatcgacctgggtaatgtggatctcagcgaagtaccacgtatgagttcc
accttcgcagagtttgaccgtgtgctgggcggcgggcttgtgcctggctctgcggtgctg
ttggggggcaatcctggcgcgggtaaatcgaccctactgctgcaaacggcctgcaagctg
gcccagcagcgtcgtatcctctatgtgacgggggaggagtcgctctctcaggtcgccatg
cgtgcccatcgcttacagttgcccaccaatggtttgaaaatgctggccgagaccagtgta
gaaactattctggcggtggctgagcgggagaaaccagagattttggtgatcgactccatc
caaaccatgcatctggaagatatagcttctgcgcctggtggcgttgcccaagtgcgcgag
tcggccgccgcgctgacgcgctttgccaagaagaccaataccgtcttattactggtgggg
cacgtcaccaaagacggttcactggctggccctaaagtgcttgagcatatgattgatgcc
tcgctgttattagaaggcggtgcagactcacgctttcgcaccctgcgcggacagaaaaac
cgctttggtgccgttaacgagctcggcgttttcgctatgctagagcagggccttaaagag
gttaaaaatcccagcgcgatctttctttcccgtcaggaggagcaggccccaggtagctta
gtcatggtcgtctgggaaggcactcggccgattctggtcgaggttcaggcgctggtggat
gagtccgcgctgggtaatccacgccgagtcgccgtcggcgtggatcaaaaccgtctggcc
atgctgttagcggtacttaatcgccacggcggcctgtttaccggcgaccaggacgtattt
ttaaacgtcgtcggaggtgtcaaagtgctcgaaaccagcgctgatttggcagtactgttg
gcggtggtctctagcctgcaaaaccgagccctgcccaaagagctggtggtctttggtgag
gttggactatcgggcgaaatacgcccggtgcccagtggtcaggagcgcatcgccgaagcc
gccaaacacggttttctacgtgccattgtaccccgcgctaatgcccccaagcagccgccc
aaaggtatggaggtcattgccgtggataagcttagcgacgcgctggacgctctgtag
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