Halomonas sp. R57-5: HALO1050
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Entry
HALO1050 CDS
T04029
Name
(GenBank) Primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALO1050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO1050
Enzymes [BR:
ham01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HALO1050
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALO1050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
HypA
AAA_19
TrwB_AAD_bind
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CEP34732
UniProt:
A0A0D6E5G1
LinkDB
All DBs
Position
I:complement(1144174..1146396)
Genome browser
AA seq
740 aa
AA seq
DB search
MPTQAPAQVLKVALPSPLRRLFDYLPAREMPPCGWQPGLRVRVPFGRREVIGVVVELADH
SDLPSSQLRGISEALDDTPLPEDWLWLCRFAARYYQHSLGDTLHHAMPARLRQGHPMAGR
TQTLWLAQGEDAAETLSRAPKQAALHALLRQHPHGLPGRAVSAHGFARDQLLALEKKGLA
TSQEHILMAPTPPSGNLLATPALPLNREQATALAALHEKIDGYHPCLLEGVTGSGKTEVY
LQLIEAVAAKGKQSLVLVPEIGLTPQTLARFRSRFRVPVVALHSGLTDPERLDVWEAAAS
GRALIIIGTRSAIFTPLANPGAIIVDEEHDGSYKQHDGLRYHARDLAVARAHYHKIPLLM
GSATPSLESLHQALAGAYRHLRLTQRPSQHPPAKLELIDLRHQRRQGGLLPGAIKAIKST
LSAGKQVLIFINRRGFAPTLACHACGWMADCNQCDARMTLHRQPPLLACHHCDSRRALPD
ACPECGSGDLRALGSGTERTEETLQTLFPKTTIHRIDRDSTRRKDSFEQVLKEIQRGEPC
VLVGTQMLAKGHHLPHVTLVVVVNADGGLYAADFRALEHSAQLLEQVAGRAGRAAHPGRV
LVQTLHHDDPHLGQLAEHGYGALARNMLEERRIAQLPPFCFMALLRIESPKEEAALAMAQ
QAAQALRQWLKESRVATRCLGPVPAPMERRQNRYHLHVMLAADKRSQLHPAVSWLVQWLE
ANREARKVRWSIDIDPQTLA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcccactcaagcacccgctcaagtgcttaaagtagcgctgccctcgccgctgcgccgc
ctgttcgactacctgccagccagggaaatgccgccctgcggctggcagccggggctaagg
gtgcgggtgccctttgggcgacgcgaagtcatcggcgtggttgtcgaattggccgaccac
agcgacctgccaagcagccagctacgtggcatcagcgaagcgctggatgacaccccgctg
ccggaagattggctgtggctatgccgctttgccgcccgttactaccagcacagcctgggc
gataccctgcaccacgctatgcccgcgcggctacgccagggccacccgatggccggtcgc
acccaaaccctttggcttgcccagggcgaagatgccgcagaaacactcagccgagcacct
aaacaagcggcgctgcatgcgctgctgcgccagcacccccacgggctacccggacgcgcg
gttagcgcccacggctttgctcgcgaccagctattagcgctagagaagaaaggtttagcg
accagccaggaacacatcctgatggccccaacgccgcccagcggcaacttactggcaaca
ccggccctgccgcttaaccgtgaacaggcgacggcgctggcagcgctgcatgaaaagatc
gatggctatcacccttgtttgctcgaaggggtcaccggcagcggcaaaactgaagtctac
ctgcagcttattgaagccgtcgccgccaagggcaagcagtcgctggtactggtaccggaa
attggcttaactccacagacactcgcccgctttagaagccgctttcgggtacccgtggta
gcgctgcactcaggcctcaccgaccccgaacggctagacgtgtgggaagccgccgccagc
ggtcgggcgctgatcatcatcggcacccgctcggcgatttttaccccgctggccaacccc
ggcgcaattattgtcgatgaagagcacgacggctcctacaaacagcacgacggtttgcgc
taccacgcccgcgatcttgcggtggcacgcgcccactaccataaaattccgctgctaatg
ggcagcgccaccccttcgctggagagcctgcatcaggcacttgccggtgcctaccgccat
ctgcgccttacccagcgccccagccaacacccaccggccaagctggaattaatcgatcta
cgtcaccagcgccgccagggtggcctgttacccggcgccatcaaagcgattaaaagcacc
ttgagcgctggcaagcaggtgctgatttttatcaaccgacgcggctttgccccgaccctt
gcctgccacgcctgcggctggatggctgattgtaaccagtgcgacgcgcgcatgacgctg
caccgccagccaccgctgctggcctgtcaccactgcgatagccgccgcgccctaccggat
gcctgccccgaatgcggcagcggcgacctacgcgccctgggtagcggaacggagcgcacc
gaagagaccctgcaaacgctgtttccgaagaccaccatccaccgcattgaccgcgatagc
acccgacgcaaggatagctttgagcaagtattaaaagagattcaacgcggcgagccctgc
gtgttggtcggcactcaaatgctcgccaaaggccaccacctaccccatgtcacgctggtc
gtggtggtcaatgccgatggcggcctctacgccgctgatttccgtgctctcgaacatagt
gcccagttgcttgagcaagtggcgggccgggccggtcgcgccgcccaccctggccgcgtg
ctggtgcaaaccctgcaccacgacgatcctcatctgggccaattggccgagcatggctat
ggggcgctagcgcgcaatatgctcgaagaacgacgtatcgcccagctgcccccgttctgc
tttatggcgctgctacgcatcgaaagccccaaagaggaggccgctttagccatggcgcaa
caagccgcccaggccctgcgccagtggcttaaagaatcccgcgtggccacccgctgccta
gggccagtgcctgccccgatggaaagacgccagaaccgctaccatttacacgttatgcta
gcagccgataaacgcagccaattgcaccccgccgttagctggctggtgcagtggcttgaa
gccaatcgcgaagcacgcaaggtacgctggtcgattgatatcgacccacaaaccctcgcg
tag
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