Halomonas sp. R57-5: HALO1064
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Entry
HALO1064 CDS
T04029
Name
(GenBank) Pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ham03009
]
HALO1064
Enzymes [BR:
ham01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HALO1064
Ribosome biogenesis [BR:
ham03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HALO1064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF7443
Motif
Other DBs
NCBI-ProteinID:
CEP34746
UniProt:
A0A0D6E4N8
LinkDB
All DBs
Position
I:1162014..1162889
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AA seq
291 aa
AA seq
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MSQSDNTTPPTSEKLQKVLARAGLGSRREMETAISAGRVKVNSQVAKLGDRVEARDKVSF
DDRPVALRPEEEAPRRVIMYNKPEGELCTRKDPEGRRTVFERLPRLKGERWIAIGRLDIN
TSGLLLFTTDGELANRLMHPSTQVEREYAVRVMGEVKREHILAMVDGVMLEDGPARFTDV
QEFGGEGINTWFHVVILEGRNREVRRLWESQALTVSRLKRVRYGNIFLDKRAKAGEWVEL
TQDEVDDLATLANLETRKVPALTPDEKNRWNRDKHKRKPVQALRKPKSKAR
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagagtgataacaccacgccccccaccagcgaaaagctgcaaaaagtcttggcc
cgtgcaggccttggttcgcggcgcgagatggaaacagcgatttccgccgggcgcgttaaa
gtgaatagccaggtggccaagctgggcgaccgcgttgaggcgcgggacaaggtcagcttt
gatgaccgcccagtggcgctgcgtccggaagaagaggcgccgcgtcgggttattatgtac
aacaagccggaaggcgagctgtgcacccgtaaagacccggaaggtcgacgcaccgtattt
gaacgtttgccgcgcctgaaaggcgagcgctggattgcgattggccgcctggatatcaat
accagcggtttgctgctgtttaccaccgatggcgaattggccaaccgcttgatgcatccc
tctacccaggtagagcgcgagtatgcggttcgcgtgatgggggaagtgaagcgcgaacat
atcctggccatggtcgatggcgttatgttggaagatggcccggcgcgctttaccgatgtg
caggagtttggtggcgagggtatcaacacctggttccacgtggtgattctggaagggcgc
aaccgtgaagtgcggcgtctttgggagtctcaggcgctgacggtgagtcgtctgaagcgc
gtacgctatggcaatatcttcctcgataagcgggcaaaagccggcgaatgggtcgaactt
actcaggatgaggtggatgacttagccacgctggctaacttggaaacccgtaaagtgcca
gcgctgacgcccgatgagaagaaccgctggaaccgtgataagcacaagcgcaagccggta
caggcgctgcgcaagccgaaaagcaaagcccgttaa
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integrated database retrieval system
