Halomonas sp. R57-5: HALO1092
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Entry
HALO1092 CDS
T04029
Name
(GenBank) Putative uncharacterized protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03030
DNA replication
ham03430
Mismatch repair
ham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HALO1092
03430 Mismatch repair
HALO1092
03440 Homologous recombination
HALO1092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ham03032
]
HALO1092
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO1092
Enzymes [BR:
ham01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HALO1092
DNA replication proteins [BR:
ham03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HALO1092
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HALO1092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CEP34774
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All DBs
Position
I:1196865..1197527
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AA seq
220 aa
AA seq
DB search
MSGMRLLDRHVGLFSGSLRTLLRRESDRRRCADSPYAWLFQPYMGDELVALVCTTTLTSA
SPVISLAAVVLSQQQVRTSRAFVMTLGSTKQPESAKLRRHHLLCEAGEVQPPSSDNLSAL
VEFIGNRPIVGWQLEQRIGALNTLLTKRLNFALPNAQVDVARLHQRQLRRLHPEVEAPSS
FAQALACWQVPAMGVQSVLAEATASALLYMRLQRVMAEVA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggaatgcggctgttagatcgacacgtagggctatttagcggttcattgcgcacc
ttactgcgccgtgaaagtgatcgtcggcgttgtgcggattctccctatgcgtggctgttt
caaccttatatgggcgatgagctggtagccctcgtctgtacgacaacgctcacgtcggca
tcgccggtgatcagcttggcggcggtggtgctgagccagcagcaggtacgaaccagccgc
gcttttgtgatgacgttaggcagcacgaaacagcccgaaagtgcgaagctgcgccgtcat
catttgctatgtgaggcaggggaggtgcagccgccaagcagtgataacttgagcgcgtta
gtggaatttatcggcaaccggcccatagtgggctggcagttggagcagcgcattggagcg
ttgaatacactactgactaagcggctgaattttgcgctacccaatgcccaggttgatgtg
gcgagactgcatcagcgccaactgcggcgtttgcatccggaggtagaagcgcccagcagc
ttcgcccaggcgctggcatgctggcaggtgcctgccatgggtgtgcaaagcgtgcttgcc
gaggcaaccgccagcgcacttctgtatatgcgcctacagcgcgttatggcggaggtggca
tag
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