KEGG   Halomonas sp. R57-5: HALO1307
Entry
HALO1307          CDS       T04029                                 
Name
(GenBank) DNA polymerase III polC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ham  Halomonas sp. R57-5
Pathway
ham03030  DNA replication
ham03430  Mismatch repair
ham03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ham00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HALO1307
   03430 Mismatch repair
    HALO1307
   03440 Homologous recombination
    HALO1307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ham03032]
    HALO1307
   03400 DNA repair and recombination proteins [BR:ham03400]
    HALO1307
Enzymes [BR:ham01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HALO1307
DNA replication proteins [BR:ham03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HALO1307
DNA repair and recombination proteins [BR:ham03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HALO1307
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: CEP34989
LinkDB
Position
I:1421236..1421961
AA seq 241 aa
MRGIRPRQKITQADWQGYMAQRAQQAGNPALQQFFSTSLPDPETPISEVPMVALDMETTG
LDERRHAIVSIGVVPFTLSRIKLAERRYWVVKPPRPLDEASIAFHHITHSEIAQAPDLEE
ILDELLAQLAGRLVVVHFRNIERPFLDAAVKARRKEGVLFPMIDTMSLEARLHRQSLWAR
FRRWLGRPPVSIRLHASRERYGLPAYQGHHALVDALATAELLQAQIATHYRPDTPLKDMW
C
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgcggtatacgcccacgtcaaaaaatcacccaggccgactggcagggctatatggcc
cagcgggcgcagcaggcgggtaatcctgcgcttcagcagttttttagcacctcgttacca
gatccggaaacgcccatttctgaggtgcccatggtggcgctggatatggaaaccaccggg
ctggatgagcggcgacacgcgattgtcagtattggcgtcgtacccttcacgttaagccgt
atcaagttggccgagcggcgctattgggtcgtcaagccgcccaggccacttgatgaagcc
tcgattgctttccaccatattacccactcggagatcgcccaggcaccggatctagaggaa
atcctcgatgagctgctggcccagctagcggggcgattggtggtcgtgcattttcgtaat
atcgaacgaccctttttagatgcagcggttaaagcccgccgtaaggaaggggtgttgttt
cctatgattgataccatgtcgctggaagcgcggctgcaccgccaatcgctatgggcacgt
tttcgccgctggctgggccgtccaccggtttccatccgcctgcatgctagccgtgaacgc
tacggtttgcctgcttatcaagggcatcacgccttggtggatgcgttggcgaccgcagag
cttttacaggcgcaaattgccacccactatcggcctgacacgcctttaaaagatatgtgg
tgttga

DBGET integrated database retrieval system