Halomonas sp. R57-5: HALO1580
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Entry
HALO1580 CDS
T04029
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HALO1580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO1580
Transporters [BR:
ham02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HALO1580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_29
AAA_25
AAA_16
RsgA_GTPase
nSTAND_NTPase5
AAA_23
DO-GTPase2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CEP35262
LinkDB
All DBs
Position
I:complement(1725630..1726739)
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AA seq
369 aa
AA seq
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MDERDSVGVAIRSISKRYGSTVALKDITLNIEPGEFVSLLGPSGSGKTTLLGALGGFVMP
SSGSVWVGDQDMTYMPPHKRNIGVVFQSYALFPHMSVGENVAFPLRARRLPKSTWPERVK
QALAMVELDGYQDRGVSQLSGGQRQRVALARAIVFEPRLILMDEPLSALDKQLRETMQIE
LRRLHRKLGATVVYVTHDQREALTMSDRVAILKDGELVQIGAPETLHNDPKDSFVASFIG
DSTLLPVTRIDEHSVRLGTHTLRSAKPIAPHAKLLLAIQTEKLLIDDGSHEPGVNRLPCR
VIETVYQGDSLRLFLELEDGTSISLRQPSHHAARRQIPPLGERLSVVLHPEDTIIVPRAG
CPTPATHVA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcgagacagtgtgggtgttgccatacgctccatcagtaagcgttacggcagt
acggtagccctgaaggacataactttaaatattgagccgggtgaattcgtgtcattactg
ggcccttcgggctctggaaaaacaaccctgctcggcgccttaggtggcttcgtgatgcct
tcttcagggtcggtgtgggtcggcgatcaagacatgacctatatgccgccgcacaagcgc
aacatcggcgtcgtctttcagagttacgcgctctttccgcacatgagtgttggcgaaaac
gtcgcctttccccttcgcgctcgtcgcctacctaaatccacatggccagagcgggtgaaa
caagccctggccatggttgagttggatggctatcaggaccgtggggtgtctcaactgtcg
ggkggccaacgacaacgggtcgctctggccagggcgattgtgttcgagccacggctaatt
ctgatggacgaacccctgtcggcgctggataaacagttgcgcgagacgatgcagattgag
ctgcgccgcttacaccgcaagctgggggccaccgttgtttatgtgacccacgaccagcgt
gaggcgctgaccatgagtgatcgggtggccatcctaaaggatggtgaactggtacagatc
ggcgctcccgaaacgctgcacaacgacccgaaagactcttttgtagccagcttcatcggc
gattccaccctgctaccggtgacccgcattgatgagcatagtgtgcggctcggcactcac
acgctgcgttcagccaagcccatcgctcctcatgcgaagttgttgctggccattcaaact
gaaaaactgctaattgacgatggtagccatgaacccggcgtcaatcgcctgccatgccgg
gtcattgagaccgtgtaccagggcgatagcctgcgattgttccttgaactggaagacggt
acctctatcagtctgcgtcaacccagccaccacgccgcaaggcgacagattccaccgctc
ggcgagcgcttgagcgtggtactgcatccagaggacaccatcatcgtgcctcgtgcggga
tgccccactccggcgacacacgttgcctga
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integrated database retrieval system
