Halomonas sp. R57-5: HALO1666
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Entry
HALO1666 CDS
T04029
Name
(GenBank) Exodeoxyribonuclease V, subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALO1666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO1666
Enzymes [BR:
ham01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HALO1666
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HALO1666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CEP35348
LinkDB
All DBs
Position
I:complement(1799628..1803245)
Genome browser
AA seq
1205 aa
AA seq
DB search
MSANSLLTQTPLTPGFMVVHANRLEDLRGLAVEWMRRHPLSPLENETILVQSNGIGQWLK
LALAEDPAQGGAGIAAALNVTLPARFLWQAYRTVLTQLTNDDHAVPETSPFDKSRLIWRL
LRLLPSLAEQEAFAPLARFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWAKGNDV
LITARGEARPLEEHQLWQPELWRALRDDVANNLGDAGLNSSRAQVHSRFLEAAVQLEGQA
CPPGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQYYWADIIEHKDLLRASR
YRQQRKAGMPDALDVLGTGDASDALHLHAQPLLAAWGKQGRDYLRLLDEHDDAGNYQTLF
EQQALRIDMFEPFSGEERNCLLSQLQDDIRELRPVAETQTHWPALDPVSDDSIVFHIAHG
PQREVEILHDQLLAAFSADPDLRPRDIIVMVPDIDRYAPHIEAVFGQYRSAFGSYNANAR
PDDPRYIPYTLSDQASRHRLPMMIALEKLLRLPELRLSVSDLLDLLEVPALRTRFGIDEH
DLPTLSRWIEGAGIRWGLNAEQRTRLDLPEGLTQNTWAFGLRRLLLGYTVGSAEAWQGIE
PFDDIGGLEASLAGPLANLLEKLESTWKTFCQPTDAASWVARLRELLETYFLTDDAQESV
MLTKLETALQQLLDSTEEAELFDPLPLSMVREHWLGQIDEHSLSQRFLAGAVNFATLMPM
RAIPFKRVCLLGMNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARQQL
YVSWVGRSQIDNNPMPPSVLVGQLRDHLEAGWHTQNGEALLEALTTEHPLQPFSRRYFSS
QASDSPAQARLFTYAHEWHALHAPRSENAQGSEPPSLQPDTEQQSTLTLAQLGGFLREPA
KAFFNNRLGVYFEQEELTQLDVEPFTLDGLQNWQLQDQLIAAQRHAVDNGQPRIEALHAA
LERFKGQGVLAVGAFGERMREALAEPMEALFGAYEEALQEWPQVVAAPQAVHVVETAAGK
VTLEDWLGELRQDDAGNRCRLLLLSSSLVSQGRGRGQYRWQHLLRPWVAHLAGNIERPMT
TQLLSKAGHVRLEPLDAENAHYQLQNMLNAWCDGMQAPLPLAPQAAFAWLAKLGTPDSET
DSDAYAAAETAYEGGRFQTGEVTQSAYLSHQWSSFERLFNERALGHSFVTLTEALYAPLH
RSVKG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaactctctgctcacgcaaacgccgctaacgccgggctttatggtggtgcat
gccaatcgcctggaagatttgcgcggtttggcggtggagtggatgcgccgacatccgctc
tcgccgctggagaacgagaccattctggtgcagagcaacggcatcgggcagtggctaaag
ctagcgctagcagaagacccggcccaaggcggtgcgggcatagccgcggcattgaacgtc
accctgcccgcgcgctttctatggcaggcctaccgaacggtgctaacgcagctaaccaat
gacgaccacgcggtgcctgaaacctcgccgttcgataagtcgcggttgatatggcgcctt
ctgcgcctgttgcccagccttgccgagcaggaagccttcgcgccgctagcacgcttttta
gaagtggatcgcgaccagcgcaagcactaccagctggccgagcgtctggcggatctgttc
gatcagtaccaggtgtatcgcgccgactggctggacgcctgggccaagggcaacgatgtg
ttgatcaccgcccgtggcgaagcccgcccgctggaagaacaccagctgtggcagccagag
ctgtggcgcgcactgcgcgatgatgtggctaataatcttggcgatgcaggccttaacagc
agccgcgcccaggtgcacagccgctttctggaagccgccgttcagcttgaaggccaagcg
tgcccacccggcctgccccggcgactgattattttcggcatctcatcgctgccgcaacag
acgttagaagccctggcggcgctgtcgcgctgctgccagatcgtgctctgcgtgcacaac
ccctgccagtactactgggcggatatcattgagcacaaagacctgctgcgcgccagccgc
taccgccagcagcgcaaggctggcatgcccgacgctttggacgtgctgggcaccggtgac
gccagcgatgccctgcacctacacgcccaaccgctgctggccgcctggggcaagcaaggc
cgcgactacctgcgcctgctcgacgaacacgacgacgcgggcaactaccaaaccctattt
gagcagcaggcgctacgaatcgatatgttcgagccctttagcggcgaagagcgcaactgc
ctactcagccaactccaagacgatatccgcgagctgcgcccggtagcagagacccaaacc
cactggcccgcgctagacccggtcagcgacgactccatcgtgtttcatattgcccacggc
ccccagcgggaagtggagatacttcacgatcagctgctggcggccttcagcgccgacccg
gatctgcgcccgcgggatatcatcgtcatggtgccggatatcgaccgctacgcgccccat
attgaagccgtattcggccagtaccgctccgccttcggtagctacaacgcgaacgctaga
cccgacgacccgcgctacatcccctacaccctttcggatcaagccagccgccaccgcctg
ccgatgatgatcgcgctggagaaattgttgcgcctgccggaattgcgcctttcggtgagc
gatctgctcgatttgctggaagtccccgccctgcgcacacgctttggcatcgatgaacac
gacctgcctacgctcagccgctggattgagggtgcaggtatccgctgggggctcaatgcc
gaacagcgcacccggctggatctacccgaagggctaacccagaacacctgggcctttggc
ctgcgccggttgctactggggtatacggtgggaagtgccgaggcgtggcaaggmatcgag
ccattcgatgatatcggcgggctggaagcctctttggcaggcccgctggcaaatctgctg
gaaaaactggaaagcacctggaaaaccttctgccagcccaccgacgccgccagctgggtg
gcccggctgcgtgaactgctggaaacctacttcctgaccgacgacgctcaagaaagcgtg
atgctcaccaagctcgaaaccgcactacagcagctgttggacagcaccgaagaagccgag
ctttttgatcccctgccgctctccatggtgcgcgaacactggctagggcaaatcgacgag
cacagcctttcccagcgcttcctggcgggagcggtcaacttcgccacgctaatgcccatg
cgcgccattccgtttaagcgtgtgtgtttattgggcatgaacgacggtgagtacccccgt
tcccagccgccgctggactttgacttgatgggcagcgactaccgccccggcgaccgctca
cggcgcgaagacgaccgctacctgtttctggaagcgctgctctccgcccgccagcagctt
tatgtcagttgggtcggccgcagtcagatcgacaacaaccccatgccgccctcggtgctg
gtcggccaactacgcgatcacctggaagcgggctggcacacgcaaaatggcgaggcgctg
ctggaagcgttaaccaccgagcacccgctgcagccttttagccgccgctacttctcttcc
caagccagcgactcccccgcccaggcgcggctgtttacctatgcacatgaatggcacgcc
ctgcacgcaccacgtagcgaaaacgcccaaggctccgagccaccgtcgcttcaaccggac
accgagcaacaaagcaccttaacattggcccagctaggcggctttctgcgcgaaccggcc
aaagcgtttttcaataaccgcctgggcgtctatttcgagcaggaagaactcactcaactg
gatgtagagcccttcaccctggacgggctacaaaactggcagttacaggatcagttaatc
gccgcccagcgccatgcagtggataacggccaaccaagaatagaagcgctgcatgcagca
ctagagcgcttcaaaggccagggcgtgctggcagtgggcgcctttggtgaacggatgcgt
gaagcgctggcggaaccgatggaggcgctgtttggcgcttacgaagaagcactgcaggag
tggccccaggtagtcgcagcgccccaggcggtgcatgttgttgaaacagctgccgggaag
gtaacgctggaagactggctgggagagcttcgccaggatgacgcgggcaaccgctgccgc
ttgctactgctcagcagtagcctggtcagccaagggcgtggccgtggtcagtaccgctgg
cagcacctgctgcgcccctgggtcgctcacttggcgggcaatattgaacgaccaatgacc
acccagctactctcaaaagcgggccatgtgcggctggagccgctagacgccgagaatgca
cactaccagctacaaaacatgctcaacgcctggtgcgatggcatgcaggccccgctaccg
ctggccccccaggccgctttcgcttggctggctaagcttggcacgcctgacagtgagacc
gatagcgacgcctacgccgccgccgaaaccgcctacgaaggcggccgattccaaaccggc
gaagtcacccaaagcgcctacctttctcaccaatggtcgagttttgagcgactgtttaac
gagcgcgccctagggcatagctttgtcacgctgaccgaggcgctctacgcgccgctgcac
cgttcggtaaaggggtga
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