Halomonas sp. R57-5: HALO1862
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Entry
HALO1862 CDS
T04029
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ham03032
]
HALO1862
03036 Chromosome and associated proteins [BR:
ham03036
]
HALO1862
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO1862
DNA replication proteins [BR:
ham03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HALO1862
Chromosome and associated proteins [BR:
ham03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HALO1862
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HALO1862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
CEP35544
UniProt:
A0A0D6E8D4
LinkDB
All DBs
Position
I:complement(2020796..2021092)
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AA seq
98 aa
AA seq
DB search
MTKSELIEQIAMRQPELSAKDVETAVRIILDDMTDSLSSGGRVEIRGFGSFSLHYREPRV
GRNPKTGDAVDLEGKYVPHFKPGKELREQVDASRALGY
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatctgaattaatcgaacaaattgcgatgcgtcagccggagttgtccgccaaa
gatgttgaaacggcggtgcgtattatcctggacgacatgacggattctctttctagcggt
ggtcgcgttgagatccgtggtttcggcagtttttcactgcactaccgggaaccgcgggta
gggcgcaatccaaaaacaggcgacgcggttgatctggaaggcaagtatgtgccgcacttt
aagccaggcaaggagctacgcgagcaggtagatgctagtcgagcactcggttactaa
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