Halomonas sp. R57-5: HALO1911
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Entry
HALO1911 CDS
T04029
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ham03000
]
HALO1911
Transcription factors [BR:
ham03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HALO1911
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
HTH_Tnp_1_2
TetR_C_4
DUF7995
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
CEP35593
LinkDB
All DBs
Position
I:2072633..2073211
Genome browser
AA seq
192 aa
AA seq
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MNVMNASPRRKELTRLAAQLFVQEGFDRTTVRMLAQEMGIKSGSLFHHFKDKQEILAAVI
EEGTQNALAIARKALAECAAEPEMRLRAMARAHLETLFTDRNAHVVALFEWRRLDPAASA
HLSHLRDAYEALWVAVIDDALAAGLIHGDRFLVSRFVLGALNWTVRWYDPNGPRSPDDLA
DELVAMIMPTPA
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaatgaatgcatcccctcgtcgcaaggaattgacgcgcctcgccgctcagcta
ttcgtccaagagggctttgaccggacgacggtgcgtatgctggcgcaggaaatgggcatt
aagtccggcagcttgtttcaccattttaaagataagcaggaaatcctcgccgcggttatc
gaagagggcacccaaaatgccttggcgattgcccgcaaagccctcgctgagtgtgccgct
gagcctgagatgcggttacgtgccatggcccgtgctcatttagaaacgctatttaccgac
cgcaatgcgcatgtggtggcgctcttcgagtggcgtcgcctggatcctgcggcaagtgcc
catttgagccatctacgcgatgcttacgaggcgctgtgggtcgctgtgattgacgatgcc
ttggcagcagggttgattcatggtgaccgctttcttgtctcgcgctttgtacttggggcg
ctcaactggacggttcgctggtacgaccctaacggccctcgctcacccgatgaccttgct
gatgagcttgtcgccatgattatgcctacccctgcttga
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