Halomonas sp. R57-5: HALO2096
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Entry
HALO2096 CDS
T04029
Name
(GenBank) Bacterial extracellular solute-binding, family 1
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HALO2096
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO2096
Transporters [BR:
ham02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HALO2096
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
CEP35778
UniProt:
A0A0D6E7R3
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Position
I:complement(2272362..2273393)
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AA seq
343 aa
AA seq
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MSLKRMNLKRLYQALLATAVISASGVATAQSSDNAICYNCPPEWADWGTQLRLIEQETGI
RVPQDNKNSGQSLAQLVAEASSPVADVVYYGVTFGIQAMEEDVVTPYQPEHWDEIPEGLK
DPEGNWFAIHSGTLGFMVNVDALDGAPVPTSWEDLLKPEYRGMVGYLDPASAFVGYVGAV
AVNLAMGGDLNDFTPAIDYFNQLAENDPIVPKQTSYARVLSGEIPILLDYDFNAYRARHS
DGANVEFVIPAEGSVVVPYVMSLVKDGPNPENGQQVLDFVLSDQGQAVWADAYLRPVRAN
AISPEAREVFLPDSEYARAEALDYPAMAAAQRSFSERYLSEVR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttaaacgcatgaaccttaagcgtctttatcaagcgttactggccacggcggtt
atcagtgcgtcaggggtcgctactgcccagtcaagcgacaacgctatctgctacaactgc
ccgcctgagtgggcggactggggcactcagttgcgtttgatcgaacaggagaccggcatt
cgcgtgccgcaagacaacaaaaactccggccaatccttagcccaattggttgccgaagcc
agtagcccggtggccgatgtcgtttactacggggtgaccttcggcattcaagccatggaa
gaggacgtagtgacgccctaccagcccgaacactgggatgagattcctgaaggtctaaaa
gaccccgaaggcaactggtttgccattcactccggcaccctcggctttatggtcaacgtc
gacgccttggatggcgcgccggtgcccacttcctgggaagatctgctcaagcccgagtac
cgcggcatggtgggctaccttgacccagccagcgcctttgtcggctacgtcggtgccgtg
gcggtcaatctagccatgggtggcgatcttaatgacttcaccccggcgatcgactacttc
aatcagctcgccgaaaacgacccaattgtgcccaagcaaaccagctacgctcgagtactt
tctggtgagatcccgattcttctcgattacgacttcaacgcttaccgcgcacgccatagc
gatggtgccaatgtagagtttgtgattcccgcagagggcagcgtagtagtgccttatgtt
atgagcctggtaaaagatggcccgaaccctgagaacggccagcaagtgcttgatttcgtg
ctctctgaccaaggccaagcggtatgggcagatgcttacctacgtcccgtgcgcgccaac
gccatttcccctgaagcgcgcgaagtctttctgcccgatagcgagtacgcccgtgccgag
gcacttgactaccccgctatggcggctgctcagcgtagcttctctgagcggtatctgtcg
gaggttcgttaa
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