Halomonas sp. R57-5: HALO2116
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Entry
HALO2116 CDS
T04029
Name
(GenBank) Oligopeptide transport ATP-binding protein oppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HALO2116
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO2116
Transporters [BR:
ham02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HALO2116
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Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
ATP-synt_ab
DUF87
Motif
Other DBs
NCBI-ProteinID:
CEP35798
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Position
I:complement(2295402..2296418)
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AA seq
338 aa
AA seq
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MALLEVNNLDVRFALRQGDVHALRDISFSLERGERLGIVGESGAGKSVAAFSLLNLIAKP
GFIAGGTVTFDGQVLNRMSERGLRKVRGNRVSMIFQDPMMTLNPVLSIGEQMVECLKAHR
RISSKEARAIALDKLRQVQIPSPDTRLDQYPHELSGGMRQRIIIAIALLLDPDIIIADEP
TTALDVTIQAEIMALLLDLCEQHNVGLILITHDLGVVSQVTQRMLVMYAGRVIEQGPTRE
IINDPQHPYTQGLINALPQMATPGERLNQIRGSMPSLSNLPSGCAFHPRCDFINRADGQP
RPACTQQVPEFVESGNCRVACHMVAEMLEDRRLKEETL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcactacttgaagtcaacaacctcgatgtccgctttgcgctgcgccaaggtgacgta
cacgccctgcgcgatattagtttcagtcttgagcgtggtgagcgcctgggcattgtcggt
gagtccggcgcgggtaaatccgtcgccgcgttctcgctactcaacctgattgccaaaccc
ggctttatcgccggtggcacggtgacgtttgacggccaggtgcttaaccgcatgtctgaa
cgtggcctgcgaaaagtgcgcggcaatcgcgtttcaatgatctttcaagacccgatgatg
acactgaatccggtgctctccattggcgagcagatggtcgagtgcttaaaagcgcaccga
cgcatctcttccaaagaggctcgcgcgattgccctggacaagctgcgtcaggtgcaaatt
ccctcgccggatacgcgcttggatcaataccctcacgagctttccggcggtatgcgtcag
cggattattatcgccattgcgctgctgctcgacccggacattattatcgccgacgagccc
accacggcactcgacgtgacgatccaggccgagatcatggcgctgctgctggacctttgc
gagcagcataacgtgggactgattctgatcacccacgacctgggcgtggttagccaggtc
acccagcgcatgctggttatgtacgctggtcgagtcattgagcaaggcccaacccgggaa
attattaacgacccgcagcacccctatacccaggggttaatcaacgccctgccgcaaatg
gcaacgccgggcgaaaggctcaatcagattcgcggcagcatgccatcgctctccaacctc
cccagcggctgcgcgtttcatccgcgctgcgatttcatcaatcgtgccgatggtcagccc
cgccccgcctgcacccagcaggtgcctgaatttgttgaatccggcaactgccgtgtggcg
tgtcatatggtcgctgaaatgctcgaagatcgccgtttgaaagaggaaaccttatga
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