Halomonas sp. R57-5: HALO2140
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Entry
HALO2140 CDS
T04029
Name
(GenBank) LysR, substrate-binding
KO
K21711
LysR family transcriptional regulator, putative pyruvate carboxylase regulator
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ham03000
]
HALO2140
Transcription factors [BR:
ham03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HALO2140
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_28
WelO5
HTH_24
Sigma70_r4
HTH_5
PBP_like
HTH_30
HTH_AsnC-type
Sigma70_r4_2
HTH_23
HATPase_c_4
Motif
Other DBs
NCBI-ProteinID:
CEP35822
UniProt:
A0A0D6E8H8
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All DBs
Position
I:complement(2319789..2320775)
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AA seq
328 aa
AA seq
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MSSPNLLNRLTFRQLQVFQAVHRQRSYSRAAEQLGLTQPAVSAQIRQLEQALGQPLFNYA
GKTLHSLPAADTLAHSTREIFGQLSRLEMNLSDINGKISGELNIAAVSSAQYVVPYLLAR
FRAHYPEVHVRLKVCNRRQALERLTEQQDDLVIMAMVPEDDRLVVMPIIDNELIAVVWPE
HPLLSMPQPSLADFARHYVLMREPGSGVRNAFEQMAANQQIALPHCIELGTNEAIKGGVM
AHLGVAVLPRLAVQLELEQGLLFELGLPDFPIHRSWCTVYTRERLPTPVAELFLSFVREH
LPDYRRHFQAPSSPLPSHGVACLPILSP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccctaatctgctcaatcgcctcacatttagacagctacaggtcttccaggca
gtgcatcggcagcgctcctattcgcgcgcggctgaacaactggggctaacccagccggcg
gtgagcgcgcaaatacgccagcttgagcaggccctgggccagccactgtttaactacgcg
ggcaaaacgctccactcgctacctgccgccgacaccctcgcccactcgacgcgagaaatt
tttggccagctgtcgcggctggaaatgaacttatcggacattaacggcaaaataagtggc
gaacttaatatcgccgcggtttcctcggcccaatatgtagtgccctacctactcgcccgc
ttccgcgctcactaccctgaggtgcacgtgcgcttaaaggtgtgcaaccgccgccaggca
cttgaacggctgaccgagcagcaggatgatctggtcattatggcaatggttcctgaagat
gaccgcttagtcgtcatgccgattattgataacgaactgatcgccgttgtctggccagag
catccactgctttcaatgccccagccctcgttagcagacttcgctcgtcactacgtgcta
atgcgcgaacccggctctggcgtgcgcaatgcctttgagcaaatggccgccaaccagcag
atcgcccttccccactgtattgagctaggcaccaatgaagcgatcaaaggcggtgttatg
gcccacttgggggtcgccgtactgccgcgtttggcggtacagctggagctagagcagggg
ttgctttttgagctggggctacccgacttccccatccaccgctcttggtgcacggtctat
acgcgggagcgtttacctactccggttgccgagctttttttaagctttgttcgtgaacac
ttacccgactaccgccgccatttccaggcaccttcaagccccttgcccagccacggtgtc
gcctgtttaccgatactttcaccttga
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