Halomonas sp. R57-5: HALO2162
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Entry
HALO2162 CDS
T04029
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03030
DNA replication
ham03430
Mismatch repair
ham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HALO2162
03430 Mismatch repair
HALO2162
03440 Homologous recombination
HALO2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ham03032
]
HALO2162
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO2162
Enzymes [BR:
ham01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HALO2162
DNA replication proteins [BR:
ham03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HALO2162
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HALO2162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Fe-ADH
Motif
Other DBs
NCBI-ProteinID:
CEP35844
UniProt:
A0A0D6E985
LinkDB
All DBs
Position
I:complement(2346665..2347732)
Genome browser
AA seq
355 aa
AA seq
DB search
MKVFADQLPAALAKKLPRVVIVAGDEPLQHRDACDAVRAAARQAGVEEREVLDVEPNFAW
GRLMEMSSNLSLFATSKLLELRLGNHKLGQEGSKALTQYAETLDNSDDVLLISMGKLDAK
QQKTAWFKTLDKHGLFVPVWPVDASRLGYWLRDRASFHGLQIDLDAARLLGERTEGNLLA
ADQELQKLALIHPQGTRLNVESIAQGVEDSTRFDVFNLADACLKGESSRASRIVNGLRSE
GVEAPIVLWALSRELRILLSLHQHLDQGQSFEHACKTQKPMIFDKRRPAYQKAIGRLPMK
RLHKLLLMAQRLDLAVKGVAAVPLWPGLHDLAMTMAGGRGLLSESAWTYRISANN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtatttgctgatcagctacccgctgcgttggcaaaaaagctaccccgcgtagta
attgtcgcgggcgatgagcccttacagcatcgcgacgcctgcgatgcggtgagggccgcc
gcgcgccaagcaggcgttgaagagcgggaagtcctcgacgtggagcccaatttcgcttgg
ggccggttgatggaaatgtcgagcaatctctcgctgtttgcgaccagcaagctgctggaa
ctgcggctaggcaatcacaagctaggccaagaaggcagtaaagcgttgacgcagtacgct
gaaaccctggataacagcgacgacgtactactgatcagtatgggcaagctagacgccaaa
cagcagaaaaccgcctggtttaaaacgctggataaacacggcctgtttgtaccggtgtgg
ccagtagatgcctcccggttgggttattggctgcgcgaccgggcatcatttcatggttta
cagattgacctggacgccgcccgactgctgggcgagcgcaccgaaggcaatctactggcg
gccgatcaggagctgcagaagctggcactgattcaccctcagggcacgcgcttaaatgtc
gagagcattgcccaaggagtcgaagacagcacccgcttcgatgttttcaacttggccgat
gcctgcttaaaaggcgaatccagccgcgcttcgcgcattgtcaacggattgcgcagtgaa
ggagttgaggccccgattgtgctgtgggcgcttagccgggagctacgtatcctgctctcg
ctgcatcagcacctggatcaaggccaaagctttgagcacgcctgcaaaacccaaaagccg
atgatttttgataagcgccgcccggcgtaccagaaagcgattggccgactgcctatgaag
cgactgcataaattgctgttaatggcgcagcgcctcgatttagccgtcaaaggcgtggcg
gcggtgccgctatggcccggcctgcacgatttggcgatgaccatggccgggggccgcggg
ctgctctccgagtccgcctggacctatcgcattagtgcaaataattag
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