Halomonas sp. R57-5: HALO2237
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Entry
HALO2237 CDS
T04029
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HALO2237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO2237
Enzymes [BR:
ham01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HALO2237
DNA repair and recombination proteins [BR:
ham03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HALO2237
Prokaryotic type
HALO2237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF294
Motif
Other DBs
NCBI-ProteinID:
CEP35919
LinkDB
All DBs
Position
I:2415592..2416275
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AA seq
227 aa
AA seq
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MANPLPDDWNQWLGNEFQADYMLALKDFLAQQKAAKKIIYPHSTQWFRAFELTPLNEVKV
VILGQDPYHGPNQAHGLCFSVQPGVPVPPSLVNIYKELATDVGFTPVRHGHLEAWAKQGV
LLLNTSLTVEQGNAASHRGKGWEPFTDRAIETVSQHAPPCVFLLWGSHARQKKALIDQGR
HLILEAPHPSPLSAHRGFFGTRHFSQANQFLQAQGRAPIEWQLPETP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggccaatccacttcccgacgattggaatcagtggctgggtaatgagtttcaggctgac
tatatgctggcgctaaaagattttttggcgcagcaaaaggccgcgaagaagatcatatat
ccccactcaacgcagtggtttcgtgcctttgaactgaccccgttgaatgaagtgaaggtg
gttattttaggccaggatccctatcacgggccgaatcaggcccatgggttatgcttttcc
gtgcagcccggtgtacccgtgccgccgtcgctggtcaatatctacaaagagttggccacc
gatgtcggttttacccccgtgcgccacggccatctggaagcatgggccaagcagggcgtg
ctgttgttaaacacctcgctgaccgtggagcagggcaatgcggcgtcgcatcgcggtaaa
gggtgggagccgttcaccgatcgcgcgattgaaacggtcagccagcatgcgccgccgtgt
gtgtttctgttatggggaagtcatgcgcgccagaagaaagcgttaatcgaccaggggcgc
cacttaatactcgaagctccgcatccttctccgctctccgcacaccgggggttttttggt
acccggcacttttcccaagccaatcaatttctgcaagcgcaagggcgagcacctatcgaa
tggcaattgccggaaaccccttaa
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