Halomonas sp. R57-5: HALO2845
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Entry
HALO2845 CDS
T04029
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ham03009
]
HALO2845
Enzymes [BR:
ham01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HALO2845
Ribosome biogenesis [BR:
ham03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HALO2845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Met_10
TRAM
Methyltransf_25
Cons_hypoth95
DREV
Methyltransf_23
MTS
SAM_MT
Methyltransf_31
Methyltransf_11
Methyltransf_15
Methyltr_RsmB-F
RrnaAD
TehB
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
CEP36527
UniProt:
A0A0D6EAM6
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All DBs
Position
I:complement(3068727..3070130)
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AA seq
467 aa
AA seq
DB search
MAMLGKRRPPRPASGHSGLAGTPGGKTRHTATDDTSPLVIERLAHDGRGVAHAANGKTVF
VDQALPGEQVEVAVHLTRKRFDEAHIKSLLTTSEQRVTPPCPHFGHCGGCDLQHLNIDAQ
RAHKREVVRDLFARQGITLDQIASIQGDDQGYRRRARLGVKVDSQGNTRLGFRAAHSHRL
VDIERCPVLVNPLQQLLAPLRELLETLEAPRQVGHIELLATPATQVVLVRQLKEHGKDAE
RWQAFAQQQAVALGTWLGRESPTLHWHGAPPTLEESLTVNGQPPLSLSFAPGDFLQVNAQ
VNQQMVAQVIQWLAPKSGQKLLDLFAGIGNFSLPIAAAGAEVHAVEGNPAMVARIAINAK
RNQLMVSGQQADLNSTVSVKELLNDHGDSDALVLDPPRSGAEVICQALAQHPVPRVVYIS
CDPATLARDAAHLVHAGYRVKQVAVADMFLHTAHMETLMLFETDVKS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttgggaaaacggcggccacccaggcctgcgtcaggtcattctggtctagcg
ggcacgccaggcggcaaaacgcggcataccgcgacggatgatacatcgcccctggtgatt
gagcgcttggcccacgatggccgtggcgttgcccacgctgccaacggtaaaaccgtgttt
gttgatcaggcgctgcccggtgaacaggtggaagtagccgttcacctcactcgcaagcgc
tttgatgaagcgcatatcaagtcattgctaacgacgtcggagcagcgcgttacaccgccg
tgcccgcattttggccactgcggtggttgcgatttgcagcatttaaatatcgatgcccag
cgtgcccataagcgcgaagtagtgcgcgacctctttgcgcgtcaaggcatcacgctggat
cagatcgcctcgattcagggggatgatcaaggctaccgtcgccgagcgcggttgggtgtc
aaagtcgatagccagggtaatacgcggcttggctttcgcgctgcccacagccaccgcctg
gtggatatcgaacgctgcccggtattggtgaatcccctgcagcagttgctagcgcccctg
cgcgagttgctggaaaccctggaggccccgcgccaggtaggccatatagagctgctggca
acgcctgcaacacaggtggtgttggtgcgtcagttaaaggagcatggtaaagacgccgaa
cgctggcaagcctttgcacagcagcaggcagtagcgctgggcacttggttggggcgtgaa
tcgcccacactgcactggcatggcgcaccgccgacgctagaagagtcgttaaccgttaac
ggccagccaccgctgagtttaagttttgcgccgggggactttttacaggtcaacgcccag
gttaatcagcaaatggtcgctcaggtcatccagtggttagcgcctaagtcaggacaaaag
ctactcgacctgtttgccggtatcggtaatttcagcctgcccatcgcggccgcgggagct
gaggtgcatgcggtggagggkaaccccgccatggtggcgcgcattgccattaatgccaag
cgtaaccagctaatggtcagcggccagcaggccgatttaaacagcactgtcagcgttaag
gagctgttaaacgatcacggcgatagtgatgcgctggtcctcgacccgccgcgtagtggc
gctgaagtcatttgtcaggcgttggcgcagcaccctgtgcccagggtggtctatatttcc
tgtgatccagcgacgcttgcccgggatgcggcacatcttgtgcatgcaggttaccgggtc
aagcaagtagcagtggcggatatgttccttcacactgcgcatatggaaacgctgatgctg
tttgaaactgatgttaaaagctga
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