Halomonas sp. R57-5: HALO2850
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Entry
HALO2850 CDS
T04029
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
ham
Halomonas sp. R57-5
Pathway
ham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HALO2850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO2850
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HALO2850
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HALO2850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
CEP36532
LinkDB
All DBs
Position
I:complement(3075257..3075952)
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AA seq
231 aa
AA seq
DB search
MSPEPAFLLHRRPYRETSALVDLLTLDHGRVRAVAHGGQRPGXKSRQRLQPFTPLFVTWQ
GSRDLKRLTLMESRGQTALLAGEGLLCGLYANEIATRLLPLELPAPELFAFYTALLEALP
APAERALALRRYEWALLEALEATPQFTTPEGSVLDPQLRYRFDTDSRAFMPAERGLDGRT
LRYIEQGDWQHEGLANALKAVMRAALAPHLGTTVLRSRELMLDLARRRHRS
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccagagccggcctttttgcttcaccgtcggccctaccgtgaaaccagtgcgctg
gtggatctattaacgcttgatcacggtagggtgcgtgctgtggcccatggcgggcaacgg
cctggcycaaaatcacgccagcgcctgcagccgtttacaccgctgtttgtgacctggcag
ggcagccgcgacttaaagcggctcacgttaatggagtcccgcggccagacggcgctgctg
gctggggaaggcctgctatgcgggctctacgccaatgagatcgccacccggctgctgccg
ttagagctgcctgcacccgaactgtttgcgttttatacggcgctacttgaggcgttgcca
gcccctgccgagcgagcgctggcgcttcgccgctatgagtgggcgctgctagaggcgctt
gaggccacgccacagttcacgacgccagagggtagcgttttggaccctcaactccgctac
cgttttgacaccgacagccgggcatttatgcctgctgagcgtgggctcgatggcagaacg
ctacgttacattgaacagggtgactggcagcatgaagggcttgccaatgcgctcaaagcg
gtaatgcgcgcggcgcttgcgccccatctggggactaccgttttacgttcacgggaactg
atgcttgatttagcgcggcgtcgtcatcggtcctga
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