Halomonas sp. R57-5: HALO2883
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Entry
HALO2883 CDS
T04029
Name
(GenBank) ATP-dependent DNA helicase rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03420
Nucleotide excision repair
ham03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HALO2883
03430 Mismatch repair
HALO2883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO2883
Enzymes [BR:
ham01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HALO2883
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HALO2883
MMR (mismatch excision repair)
Other MMR factors
HALO2883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CEP36565
UniProt:
A0A0D6EAF0
LinkDB
All DBs
Position
I:complement(3109381..3111513)
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AA seq
710 aa
AA seq
DB search
MAARVLHLLASGVPPKRILVLMFNRSAKDDFQRRLASMAPAGQALPDVRTFHSLGHRLTQ
SLCRWGALAPRQLLSADWQLERLLRQASLNVLRDAVERRDAALEGDRLETLAHFCGLVKA
EMITPEALYERLNLDPDTDYFPAAFAEGERLLATEGVMTYADLLYRPLLALEGDIDLRGR
VEGFLDHVIIDEYQDINAAQQRLLSVLVGRTAEVMAVGDANQCIYEWRGAKPDTMLENFT
ATFGSATDYPLSTTFRHGHALALAANHAIAANQRRPNQLCLAAANNPETRVAVGQGSRLL
LDALMDWQAQGRAFNEASLLVRSWALSVPFQLALLQAGIPFRLQREDRFVFRLPLVQALA
GYLKLSRRPDLLRDPQQLLLLLSQPTPFVARERLQRLAYQLAATQQXPERHDPMLTELKP
IQRRTLKKRWVLLCELPQLSAWPPAKLLRHVVESIDAEKTLKRAAARRDKGEEDVRLLDV
LIEQAQSVQDPDAFIELLERPVENQAGGVLISTVHGAKGLEWPLVAVAGVNEEDFPHYSR
DNPLSDERLEEERRLFYVAITRAQEQLLVLHDGGVHRPSRFIAESAWQDSMRVAACLVAE
SSTAASLQVTSVALVERYLARLGRDDIVLAPAQVEETKAGYSGAGSSGETHFYPGQRLLH
AVFGEGEVAAVEGSASDPVIDVRFDQAGRRRLIARRAPIEVLKNGSTLVG
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgggtactgcatctattggctagcggtgtgccgccaaagcgtatcctggtg
ctgatgttcaaccgctccgccaaggatgattttcaacgccggttagcctcaatggcaccc
gctgggcaggcgctgccggatgtgcgcacttttcactccctgggccaccgtttaacccaa
agcttatgtcgatggggtgcgctggcgccacgccagctactgtccgctgattggcagctg
gaaaggctgcttcgccaagcgagtctcaatgtgctgcgtgacgcagttgaacgccgcgat
gctgcactggaaggggatcgtcttgaaaccctggcccacttttgcggcttagtgaaggcg
gaaatgatcaccccggaagcgctctatgagcggctcaatttagaccccgacacggactat
tttccggcggcctttgccgagggcgagcggctgctagcaaccgaaggggtgatgacctat
gccgatctgctctaccgcccgctgttggctttagagggagatattgacctgcgtggtcgc
gtggaagggtttctcgatcatgtcattattgacgagtatcaggacattaacgccgcgcag
caacggcttttatccgtgctggtgggccgcacggccgaggtaatggcggtgggcgacgct
aaccagtgtatttatgagtggcgcggcgccaaacccgacaccatgctggaaaattttacg
gccaccttcggcagtgctaccgactatccgctatcgacaacctttcgccacggtcacgcc
ttagcgctcgccgctaatcatgccattgccgctaaccagcggcgccctaaccagctgtgt
ttagccgcggccaataaccccgaaactcgcgttgcggtggggcagggcagccgcctgcta
ctcgatgcattaatggattggcaggcccaggggcgagcgtttaacgaggccagcctgctg
gtgcgtagctgggcactctcggtgccatttcaactggcgctgctccaggcaggcattccg
tttcggctgcagcgcgaggatcgctttgtgtttcgtttgccgctggtgcaggccttggcg
ggctatttaaagctgtcgcgtcggcctgacctgctacgcgacccccagcagttgctactg
ctgctttcccagccgacgcccttcgttgcccgtgagcggctgcagcggctagcctatcag
ttggctgctactcagcagkggcccgaacggcacgatcccatgttgacggagctaaagccg
attcagcgccgtacgctgaaaaaacgttgggtactgctttgcgaactgccgcaattaagt
gcctggccacccgccaagctattacgtcacgtggtggaaagtatcgatgctgaaaagacg
ctgaagcgcgcggcggcgcgacgggataaaggcgaagaggatgttcgcttactcgacgtg
ctgattgaacaagcacaaagcgtgcaagaccccgacgcttttatcgagctattggaacgc
ccagtagagaaccaggcgggcggcgtgctgatcagtactgtgcacggtgccaaggggctt
gaatggccactggtagcggtggccggggtcaatgaggaagatttcccccactatagccgc
gataacccgctcagcgatgagcgtttggaggaggagcgacggcttttctatgtagcgatc
acccgcgcccaagagcaactgctggtgctgcatgacggcggcgtgcaccgtcctagccgt
tttatcgccgaaagcgcctggcaagatagcatgcgcgtcgctgcctgcctggttgctgaa
agctcaactgctgcttcgctacaggtgacctcggtggcgctggtagagcgctatctggcg
cgtcttgggcgcgacgacattgtgcttgccccggcgcaggttgaagagaccaaagccggt
tattcaggcgcgggctcttccggagagacgcacttttatcctggccagcggctgcttcat
gcggtgtttggcgagggcgaagtagcggcggtagagggaagtgccagcgacccggtgatt
gatgtgcgctttgatcaggcgggaagacggcggctgattgcccgtcgggcacccattgaa
gtgttgaaaaatggctcaacgcttgttgggtaa
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