Halomonas sp. R57-5: HALO2973
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Entry
HALO2973 CDS
T04029
Name
(GenBank) Ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ham03019
]
HALO2973
03009 Ribosome biogenesis [BR:
ham03009
]
HALO2973
Messenger RNA biogenesis [BR:
ham03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HALO2973
Ribosome biogenesis [BR:
ham03009
]
Prokaryotic type
rRNA processing factors
HALO2973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CEP36655
LinkDB
All DBs
Position
I:complement(3202881..3204344)
Genome browser
AA seq
487 aa
AA seq
DB search
MSGEVLINLTPMETRVALVENGVLQEALIERSRRRGIVGNIYKGKVVRVLPGMQAAFVDI
GLDRAAFIHAHEVMPPGTPLDEQQTIGQLLHEGQALVVQATKDPIGSKGARLTTHLSIPS
RYLVYMPDSPHHGVSQRIEDERERERLKALLDNSVAEQTLEVTGGFIVRTAAEGVGDEEL
KGDMHFLLRLWRKVSERKVTATPQSVIYDDLPLFMRTLRDVMRDDIEKVRIDSRENFVKL
VEFAEEFMPDAVERIEYYPGERPIFDLYSVEDEIQKALGRKVQLKSGGYLVIDPTEAMTT
IDVNTGGYVGHRNLEETIFKTNLEAATAIARQLRLRNLGGIIIIDFIDMVDVEHQRQVLR
VLEKALERDHAKTKCTGVTELGLVQLTRKRTRESLEQTMCEACPTCSGRGTLKTPETVCY
EIFREILREERAYSAETYMVLASQPVVDRLLDEESAAVADLETFINKTIRFQVEQHYSQE
QYDIVLM
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgaagttctcatcaatttaacgccaatggaaacccgcgtcgcgctggttgaa
aatggcgttttgcaagaggcactgatcgagcgttcccgtcggcgtggcatcgtgggcaat
atctacaaaggcaaagtggttcgtgtactgcctggcatgcaggctgcttttgttgatatt
ggcttagatcgggcagcgtttattcacgcccacgaagtgatgccacccggcacaccgctc
gatgagcagcagaccatcggccagttactccatgagggccaggcgttagtggtacaagcg
accaaagaccctatcggtagcaaaggggcgcgcttaaccacgcacctgtcgatcccttct
cgctatctggtctatatgcccgattcgccgcatcacggcgtttcgcagcgtattgaggat
gagcgcgaacgcgaacggttaaaagctctgctggataatagcgtggcggagcagacgctg
gaagtgacggggggctttattgttcgtacggccgcggaaggcgtgggtgacgaagagcta
aaaggcgatatgcactttctgctgcggctgtggcgtaaggttagcgagcgtaaagtgacc
gcgacgccgcaaagcgtgatttacgatgatttgccgctctttatgcgtaccctgcgcgac
gtaatgcgcgacgatatcgaaaaagtgcgcatcgattcgcgggaaaacttcgtcaagctg
gtggagtttgccgaagagtttatgcccgacgcggtggagcggattgaatactaccccggc
gagcggcccatctttgatctctacagcgtcgaagatgagatccaaaaagccttggggcgc
aaggtacagctgaaatccggtggctatctggtgattgaccccactgaggcaatgaccacc
attgatgtcaataccgggggctatgttggtcaccgcaaccttgaagagactattttcaaa
accaaccttgaagcagctacggccattgcccgccagcttcggttgcgcaatctgggcggc
attatcattatcgactttatcgatatggtcgatgttgagcatcagcgtcaggtgttgcgg
gtattggaaaaagccttagagcgtgatcatgccaaaaccaagtgtaccggcgttaccgag
cttggccttgttcagcttacccggaaacgcacccgggagagcctagagcaaacgatgtgt
gaagcgtgccccacctgcagtgggcggggcacgcttaaaacgccagaaaccgtctgctac
gaaatctttcgtgagatactgcgcgaagagcgcgcctatagtgctgaaacctacatggtg
cttgcatcacaacctgtcgttgatcgtttattggatgaagagtcagccgcggtggctgac
ctggagacgtttatcaataaaaccatccgctttcaggttgaacagcactactcccaagag
cagtacgatattgtgctgatgtaa
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