Halomonas sp. R57-5: HALO3098
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Entry
HALO3098 CDS
T04029
Name
(GenBank) Spermidine/putrescine import ATP-binding protein PotA
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HALO3098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO3098
Transporters [BR:
ham02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HALO3098
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA_23
SMC_N
AAA_22
AAA_29
nSTAND_NTPase5
AAA_16
AAA_30
AAA
NACHT
cobW
RsgA_GTPase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
CEP36780
LinkDB
All DBs
Position
I:complement(3346046..3347056)
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AA seq
336 aa
AA seq
DB search
MSLVDVRNVTKKFGQAIALDEVSITFEDGGFFGLLGPSGSGKTTLLRTIAGFHYPEGGSI
RIGDRNVEKIPVEERDIGMMFQNYALFPNMSVADNVGFGLRVRKVGAAEEKRRIAEVLDL
VQLGAMAGRRPSQLSGGQRQRVALARAIVTNPKVLLLDEPLSALDKSLRIDMQIELKRIQ
REIGITTIFVTHDQEEALTLSDRIGILRAGRIVQSGPPREVYDHPKDAFAAGFLGEANWL
PESRLGSLALPGGRVGRSFAVRPEALTIGAVPEDGRNSIRGRLTQRIFAGAMATCLIDVD
GQQWKLVARDRDIPELPRDGNVWLSWSPEDTIAVSA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgtcgatgtgcggaacgtcacgaaaaaattcggccaggcgattgcactggac
gaagtgtcgatcacttttgaagatggcggtttctttggcctgcttggtccgtcgggatcg
ggcaagacgacgctgctgcgcactatcgccgggttccattatcccgaaggcggcagcatc
cgcatcggggatcggaacgtggaaaagatcccggtggaagagcgcgacatcggcatgatg
ttccagaactatgcgctgtttcccaatatgagcgtcgcggacaacgtgggtttcggcctg
cgggttcgtaaagtgggcgcagcagaggaaaaacggcggatcgccgaggtgctggatctc
gtgcagcttggtgcgatggccggacgacgcccgagccagctttcgggcgggcagcggcag
agggtggcgctggcacgggccatcgtgaccaaccccaaggttctgctgctggatgaaccg
ctgtcggctctggacaaatcgctgcggatcgacatgcagatcgagcttaaacgcatccag
cgtgaaatcggcatcaccacgatttttgtcacccacgatcaggaagaggcgctgacattg
tcggatcgcatcggcatcctgcgggcagggcgtatcgtgcagtcaggtcccccgcgagag
gtgtatgatcatcccaaagacgcctttgccgcagggttcctgggagaagcgaattggctg
ccggaaagccgtctgggcagccttgccctcccgggtggtcgcgttgggcgcagctttgcc
gttcggcccgaagcgctgacaatcggcgcggtgccagaggatgggcgcaattctattcgg
gggcggctgactcagcgcatttttgccggagctatggccacctgtctgattgatgtcgat
gggcagcagtggaaactggtcgcgcgggatagggatatccccgaactgccacgggatggc
aatgtctggctaagttggtcgccagaagacacgattgcggtgtcagcatga
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