Halomonas sp. R57-5: HALO3101
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Entry
HALO3101 CDS
T04029
Name
(GenBank) Periplasmic spermidine/putrescine-binding protein or ABC transporter
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HALO3101
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO3101
Transporters [BR:
ham02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
HALO3101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
TrwC
Motif
Other DBs
NCBI-ProteinID:
CEP36783
UniProt:
A0A0D6EAQ5
LinkDB
All DBs
Position
I:complement(3348777..3349811)
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AA seq
344 aa
AA seq
DB search
MKTTLLSLSALALTTGTALADEIRVLNWQGYGTDQSFSIEPFEEATGHTVVHEYFNSEQE
MLTKLRTNPGAYDVVMINAVFTPQAIEEELLAPIDASVIENYAGVPERFAQDSKLVSDND
VYGVPWTWGLTSFAFNTSVIEEAPDSIEALWNPAYAGRISIRDDALEAMQLAALATGQDI
NNIEDLDAAEEKLAALMPNLRTFWSSENDWNQYMAAGELDIASYWSGSAARSASLGLPVE
FVVPKEGAIGWLDALSIPATSEHREAAQQFIDWMIDPEFYTRWDQEGAPASANADAAAAL
PEDAFNKRVLGDPEVVARAKFQAPVTDESREAYLEIWQGLKAAQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaacattgctttccctttccgcgcttgctctgacgacgggtaccgccctggcg
gatgaaattcgcgttttaaactggcagggctacggcactgaccagagcttttccatcgag
ccctttgaagaggcgaccggccataccgttgtgcatgaatatttcaactccgagcaggag
atgctgacaaagctgcgaaccaaccctggcgcttatgacgtggtaatgattaatgccgtc
ttcactccgcaggccattgaggaagagttgctggcgcccattgacgcttcggtcatcgaa
aattatgcgggtgtgccggagcgctttgcgcaggactcaaaactggtttcagataatgac
gtctacggtgtgccatggacatggggcctgacatcctttgctttcaacacatcggtgatt
gaggaagcgcccgacagcatcgaggcgctgtggaatcctgcctatgcaggtcgcatttcg
atccgcgacgatgcgcttgaggcgatgcaactggctgcgctcgcgaccgggcaggacatc
aataatattgaagacctggacgcggcggaagaaaagctcgcggcgctgatgcccaactta
cgaaccttctggagcagcgaaaacgactggaaccagtacatggccgcaggcgagttggac
attgctagctattggtccggttcggccgcccgctccgcctcccttggcttgccggttgaa
ttcgtggtgccgaaagagggtgcgattggctggctcgatgccttgtcgatccccgcgacc
tctgaacacagggaggctgcgcagcagttcattgactggatgattgatcctgaattctac
acccgctgggatcaggagggcgcgcctgcctccgctaacgcagatgcggcggcggctctg
ccagaagatgcgttcaacaaacgcgttctgggagatccggaggtggttgcgcgagcgaag
ttccaagcgcccgtcacggatgagtcgcgcgaggcctatttagaaatatggcagggactg
aaagccgcccagtaa
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