Halomonas sp. R57-5: HALO3172
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Entry
HALO3172 CDS
T04029
Name
(GenBank) Capsular polysaccharide export protein
KO
K07265
capsular polysaccharide export protein
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
HALO3172
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Gene cluster
GFIT
Motif
Pfam:
Capsule_synth
DUF6716
Motif
Other DBs
NCBI-ProteinID:
CEP36854
UniProt:
A0A0D6EC03
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Position
I:3431903..3433144
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AA seq
413 aa
AA seq
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MKDQKRAFLFLQGVCSPFYQRLAKRLVNDGHRVVKVNFNAGDIVYWQRTHGESHLFRGPT
SELPGYIKALWDQYGITDQVVFGDRRPIHRPAVDNAAAAGVRTHVFEEGYFRPFWITLER
EGVNGHSLLPRDPSWFYETGKALPEPAAPVRFRSSFKIRAMHDVGYHLAGLTNPLVAPHY
RNHAPITAPVEYAGYLKRFAQLKAVWKKRDAERIKTLIESRRPYFMLPLQLNSDAQIRDH
SPYANMQQVMDDVMASFAQHAPSDTQLCIKNHPLDMGLVNYPKIIKQLEERHGLQGRIVY
LESGDLNALLKHANGNVTVNSTVGIVSLEKNCPTFALSDPIYNLDGLTYQGDLADFWQQP
QPPNSELFGYFQKTVMHAVQVNGGYYCQPGIDLAVENAARILEACPSPLEKLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggatcagaagcgtgcattcttatttttgcagggcgtatgctcaccgttttaccag
cgtttagccaagcgcctggtcaacgatggacaccgcgtcgttaaggtcaactttaatgcg
ggcgatatcgtctactggcagcgcacccacggcgaaagccacctgttccgtggccccacg
tccgagttacccggctatattaaagcgctgtgggatcaatacggcattaccgatcaggtt
gtgttcggcgaccgtcgccctattcaccgccccgcggtcgacaatgccgctgcagccggt
gttcgcacccatgtgtttgaagagggctactttcgccccttctggatcaccctggagcgc
gaaggcgttaacggccactcgctgctgccccgtgacccaagttggttttatgagactggc
aaagcgctgcccgaacccgctgcgccggtgcgctttcgctcctcgtttaaaattcgcgca
atgcatgatgtcggctaccacttggccgggctaaccaacccgctggtggcaccgcactac
cgcaatcatgcgccgatcacagcccccgttgaatacgcgggctacctcaagcgttttgct
caattaaaggcggtttggaaaaagcgcgatgctgagcgcatcaaaacgctgatcgaaagc
cgtcgcccttactttatgctgccgctgcagttgaatagcgatgcgcagattcgcgaccac
tccccctacgccaatatgcagcaagtgatggacgatgtgatggcctcgtttgcccagcac
gcgcccagcgatacacagctatgcattaagaaccacccgctggatatggggctggtcaac
taccccaagatcatcaaacagcttgaagagcgccacggcctgcaaggccgtatcgtctat
ttggagtcgggggatctcaacgccctgctaaaacacgccaacggcaatgtgaccgttaac
agcaccgtgggcatcgtatcgctggagaaaaactgccccaccttcgcgcttagcgaccca
atctacaatctggacgggctgacctaccaaggcgacttagcggatttttggcagcagccg
cagccgcctaacagcgagctatttggctattttcaaaagaccgtgatgcacgccgttcag
gttaacggtggctactactgccagcccggtatcgatttagccgtagagaacgccgcccgc
atactcgaagcctgcccgtcgccgctggagaagttactgtga
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