Halomonas sp. R57-5: HALO3209
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Entry
HALO3209 CDS
T04029
Name
(GenBank) Lipid A core-O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham00540
Lipopolysaccharide biosynthesis
ham01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HALO3209
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ham01005
]
HALO3209
Enzymes [BR:
ham01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
HALO3209
Lipopolysaccharide biosynthesis proteins [BR:
ham01005
]
Core region
HALO3209
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
CEP36891
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All DBs
Position
I:complement(3479049..3480290)
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AA seq
413 aa
AA seq
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MPFTILEDSKSIFYASASVFIFGALSLVVPSGYSFGAVLLLIGGLALPLLRPQFFISRRD
CFVMTTMALYAFTIILLAWFYDEGSRAYDRPSRLLLAIPALLFLLANPPRLSAMWSGFAL
GAIGAGGWALCQKLLLNTVRAGGYTHVIQFGNLSMLLGILCLAGMGWAILQPHRKRWLVL
LALGAVMGILGSLLSGSRGGWVGFPLILLVLYRSYGKEWPLKWKGALAFGLVLGGVTVFA
LPQTGVQERVFQAVDDISLYVSGESQDTSVGARFEMWKGASHLISDRPILGWGQNGYLKG
MTTLAEDGIVSAGILQFDHAHNEFLDTFAKRGLIGLAVLLLLYLVPMKLFSEYLRHSNLE
IRAVAVAGFLLPVAYIDFGITQTFLGHNSGVMMYAFLLAILWGIHSRHRKQLN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtgccatttactattttagaagattctaaatctattttttatgcaagtgcttctgtgttt
atttttggggcactttcattggtggtaccttctggttactcgtttggtgctgtgcttctt
ctgataggagggttagctctccctctgctaaggccgcaattttttataagtcgtcgtgac
tgcttcgtcatgactactatggcactttatgctttcaccatcatcttgttggcatggttt
tatgatgaaggctctcgtgcttatgatcgaccaagtcgattattgctagctatccctgca
ttattatttttgcttgcaaatccaccacgcttatcggcaatgtggagtggctttgcattg
ggcgccattggtgcgggtggctgggctttatgccagaaactgctattaaatactgtgcgt
gcgggtggctatacccacgttatccagttcggcaatttgagtatgctattgggcattctc
tgccttgcaggtatgggatgggccatattacaaccgcatagaaagcgctggttggtactg
cttgccctgggtgctgttatggggatactgggatcactcctttcagggagtcgaggtggc
tgggttggttttcctttgattctactcgttctttaccgtagctacggcaaagagtggcca
cttaaatggaaaggagcattggctttcggccttgtactagggggcgtaacggtctttgct
ttaccccaaacaggtgttcaggaacgagtatttcaggcggttgatgatatttcactttat
gtttctggtgaatcacaagacacctctgtgggcgccaggtttgaaatgtggaaaggtgcc
agtcatttaatttcagataggccaatactaggctggggtcagaatggctatttgaaaggc
atgactacgctggcagaagatggcatcgtcagtgctggtattttgcagtttgaccatgca
cacaatgaatttcttgacacttttgcaaagcgaggtctgatcggtcttgccgtacttcta
ttgctctatttagtgccgatgaagctatttagcgagtatttaaggcatagcaacctagaa
atacgtgcggtggcagttgccgggtttttgttgcccgtggcctatatcgattttgggata
acccaaacctttttgggacataacagtggagtaatgatgtatgcctttctgttggctatt
ttgtggggaattcactcacgtcaccgcaaacagctaaactaa
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