Halomonas sp. R57-5: HALO3383
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Entry
HALO3383 CDS
T04029
Name
(GenBank) GntR family transcriptional regulator
KO
K24967
GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ham03000
]
HALO3383
Transcription factors [BR:
ham03000
]
Prokaryotic type
Helix-turn-helix
GntR family
HALO3383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTRA
GntR
DUF4423
HTH_DeoR
HTH_36
HTH_Crp_2
HVO_A0261_N
HTH_11
Terminase_6
DUF8612
TrmB
MarR
Rrf2
CggR_N
Motif
Other DBs
NCBI-ProteinID:
CEP37065
LinkDB
All DBs
Position
I:complement(3678357..3679091)
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AA seq
244 aa
AA seq
DB search
MDPRFTHLRLDPQGATPLYQQLARQLEHAIETGAWETGEALPSERSLADTLNVSRITARK
ALDCLAELGLIRRSRGSGTFITPRLNQSLTRLVSFTELLTQRGFTPSSQWLERRLATPNA
EESMRLGLGADAQVARLKRLRLADEVVMAVEDSCLPVSVLPDPQSVETSLYAVLEASGKS
MARALQHVTAINADAELAVLAEVPEGQALLKITRLGYLADGTPAELTVTYCRTDYYDFMV
ELTR
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgctttacccacctgcgccttgacccgcagggagcgacaccgctctaccag
cagttagcccgtcagttggagcatgccatcgagacaggcgcttgggagaccggcgaggcg
ctgccttcagagcggagcttggccgataccctcaatgtctcgcgtattaccgcgcgcaag
gctttggattgtttggctgagctggggctcattcgccgtagccgtggttctggcaccttc
atcacgccgagacttaatcagtcgttaacccgattggtgagtttcaccgagctactgact
cagcgtggttttacgccaagttctcaatggttagagcgcaggctggcaactcccaacgcg
gaagagagtatgcgtcttggcttgggtgccgatgcccaggtggcgcgccttaagcgttta
cgtttggctgatgaggtggtgatggcggtagaggatagctgcctacctgtatcggtgctg
cccgatcctcaatcagtagaaacgtctctctatgcggtactggaagccagcggtaagtca
atggctcgagccctgcagcatgtcaccgccatcaacgctgacgcagagctagcggtgctc
gccgaagtgcccgaggggcaggcgttgcttaagatcactcggctagggtatctggccgat
ggcacgccagcagagcttacggtgacttactgccgcaccgattactacgactttatggtc
gaactgactcgctag
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