Halomonas sp. R57-5: HALO3454
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Entry
HALO3454 CDS
T04029
Name
(GenBank) Tripartite ATP-independent periplasmic transporter, DctQ com
KO
K11689
TRAP-type transport system small permease protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HALO3454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO3454
Transporters [BR:
ham02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HALO3454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
DUF963
DUF3930
Motif
Other DBs
NCBI-ProteinID:
CEP37136
LinkDB
All DBs
Position
I:complement(3754993..3755586)
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AA seq
197 aa
AA seq
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MSLSSTPPNTSTPIEDPSVYLDDPNRKSLEIDTDTRQGPALFRWLTLGMEYLIGAILVAL
IVSVSCNVVGRALFNYSLPWADELARMLFIWLVFIGAAAAFSRYEHIAVDALVRRLPLRL
AHMLYLLQHLIITGLMVVMIWGGYQVLARSSGRSAIMNVPLSLISLSLVLCVIFIAVVSM
WRMWVSLNVIRHPERER
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctcctctacaccccccaatacgtctacgccgattgaagacccctcggtgtat
ctggatgatcccaaccgcaaatcactggaaatcgataccgacacccggcaagggccagcc
ctgttccgctggctgaccttagggatggagtatctgatcggcgctattttagtggcgttg
attgtgtccgtttcctgcaatgtggtggggcgtgcgctgtttaattactcgctgccctgg
gcggatgagctagcgcgcatgctgtttatatggctggtgtttatcggcgccgctgccgct
ttttcccgctacgagcatattgccgttgacgcactggtgcggcgcctgccgctgcgtttg
gcgcatatgctctatctgctgcagcacctgattattaccggcctgatggtggtaatgatt
tggggcggctaccaagtgctggcacgctctagtgggcgttcagcgattatgaacgtgccg
ctgagtttgatcagcctttcgctggtgctgtgcgttatctttattgcggtggtttcgatg
tggcggatgtgggtcagcctgaacgttattcgccaccctgagcgggagcgctaa
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