Halomonas sp. R57-5: HALO3598
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Entry
HALO3598 CDS
T04029
Name
(GenBank) Putative L,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ham01002
]
HALO3598
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ham01011
]
HALO3598
Peptidases and inhibitors [BR:
ham01002
]
Cysteine peptidases
Family C82
HALO3598
Peptidoglycan biosynthesis and degradation proteins [BR:
ham01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HALO3598
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
GMC_oxred_C
Motif
Other DBs
NCBI-ProteinID:
CEP37280
UniProt:
A0A0D6ECF2
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Position
I:complement(3901894..3903531)
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AA seq
545 aa
AA seq
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MNEILPLRRWAIGVALGLTLTHSPLGISTVYADSAPLQQALAQQLSSSVEAHRLPIAEFY
QLRDGQPAWQSAVAVESLVAGLNSLAIDGLAPEDYHADTLLDEFQRSQAGDEAAQASFDV
KATRSLLLALDHLERGKVNPRDVESQWDAPRPERGYSLLRVVHAVDDRELENAMALARPS
SAEYQQLRATLKQHYQLANLGSVPYLDARDESLRPGDEADDVSVLRQRLALWGEAELQVA
DGSAYPMISVQAASNRRTFDAPLEAAVRRFQRRHLLQEDGVVGEQTRLALNTSVAARIDQ
LRVNLERARWIRPMQSAEPRVWVDIAGYRMHYVRPNGQHWDARVVVGSSRRETPIIHSTI
SHLTINPSWTIPPTIMREDVLPQVRADIDYLARKNIQVISLSGEQLVAEEIDWQRPGGVM
LRQVAGSGNPLGRVVVRFPNDDMIYLHDTPARGLFQREQRALSSGCIRVEGVAELAQMLL
QDTGSRYQMSTLLSGGSDRNVSLTQRIPIALHYLTAWPNAEGEVEFRPDIYRRDATLLAA
LRRPV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagatactgccactaagacgatgggcgataggggtcgctctaggtctaacgctt
acccacagccctttaggcatcagcactgtgtatgcggattcagcgccgctacaacaggcg
ctagcccagcagttaagctcgtcggtggaagcgcatcggctccccatcgctgagttttat
cagctgcgcgatggtcagcccgcctggcagtcggcagtggcggttgagtcattggtcgct
gggctaaatagcttggcaattgatggtctggcacccgaagactaccacgctgatacgctg
ctggatgagtttcagcgcagtcaggccggtgatgaagccgcccaggcgtcgtttgatgtt
aaagcgactcggtcgctgctgctggcgctggatcatttagagcgcggcaaggtgaacccg
cgtgatgtcgagtcccagtgggatgcgccgcgccctgaacgtggctactcgttgctgcgg
gttgtgcatgccgtcgatgaccgtgagcttgaaaacgccatggcgttagctcggccctca
tccgccgaatatcagcagttgcgcgctacattgaagcagcattatcaattggctaacttg
ggcagcgtgccctatctagacgctcgggatgagtcgctgcgcccaggtgacgaagccgac
gatgtaagcgtgctgcgccaacgtttagcgctatggggggaggcggagttgcaggtggcc
gacggtagtgcttatccaatgattagcgtgcaggcggcgtctaaccgtcgcacctttgac
gcaccgctagaggccgctgtgagacgttttcaacgccgccatctgctgcaggaagatggc
gtggtgggtgagcaaacccgtttggccttgaacacttcggtggcggcgcgaatcgaccaa
ctacgggtcaatctagagcgcgcgcgctggattcgtccgatgcagtctgccgaaccacgg
gtgtgggtcgacattgcgggctaccggatgcactacgtgcggcctaacggccagcattgg
gatgcccgggtggtggtcggttcatcgcgccgtgagacgccgattatccactccacgatc
agtcatttaaccattaacccttcctggacgatcccgccgaccattatgcgtgaggatgtg
ttaccccaggtacgtgccgatatcgattatttggcgcgtaaaaacatccaggtgattagt
ctgtcgggtgagcagttggttgctgaggagattgattggcagcgcccgggcggcgttatg
ttgcgtcaagtggcgggctcaggtaacccgctaggccgtgtcgtggtgcggtttcccaac
gatgacatgatctatttgcacgatacccccgcgcgggggttattccagcgtgaacagcgc
gcgctcagttcgggctgtattcgagttgaaggtgtggctgagctagcccagatgctgttg
caagacaccggcagtcgttaccaaatgagtacgctattgagtggcgggagcgatcgcaac
gtgagtttgacccagcgtattcccattgcgctgcactacttaaccgcgtggccgaatgcc
gaaggcgaggtggagtttaggcctgacatctaccgccgcgatgcaacgctactggccgca
ttgcggcgtccggtttaa
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