Halomonas sp. R57-5: HALO3799
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Entry
HALO3799 CDS
T04029
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ham
Halomonas sp. R57-5
Pathway
ham03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HALO3799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO3799
Enzymes [BR:
ham01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HALO3799
DNA repair and recombination proteins [BR:
ham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HALO3799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
CENP-K
Motif
Other DBs
NCBI-ProteinID:
CEP37481
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All DBs
Position
I:4156420..4157763
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AA seq
447 aa
AA seq
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MPSPTPQALSVSQLNQRAKQTLERDVGEVWVEGELSNVSRPASGHVYFTLKDDRAQIRCA
LFRQRARFVSAPMRDGDQVKLRGRVSLFEPRGDYQLIAEAVQAAGLGELLAAFERLKAQL
EGEGVFANARPLPFPPRKLLILSSATGAAIRDVLAVLEARWPLADVTLIPVPVQGAEAAP
AMISALGLLNRQAKLDPERDVVLITRGGGSLEDLWAFNNEHLARAIFHSRLPVMSAVGHE
VDITLADFAADMRAPTPSAAAERLVPDQNTLKRQLEHQHSRLLRAMQARLERDSQRLDTL
RAKLRXPGEQLNRQRQHLTALNQRLNRAMQHTLGLQKAQVTQLSRRLASQDMARLHRAES
ERVSQLQRRLGSAMQRQLESRQARLKAAARELNAVSPLAVLGRGYAIAQDEQGQVIRRAE
DTQPGQKLKLKLGEGRLSVEVKRRLKS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccctcccccactccccaggcactctccgtcagtcaactcaaccagcgcgccaagcaa
acccttgagcgcgatgtgggcgaggtgtgggtggagggcgagctctctaacgtttcccgc
ccggcgtcggggcatgtctatttcaccttgaaggatgaccgggcgcagattcgctgcgcg
ctgtttcgccagcgggcgaggtttgtctcggcgccgatgcgcgacggtgatcaggtcaag
ctgcgtgggcgggtgtcgctatttgaaccccgcggcgattatcagctaattgccgaggcc
gttcaggcggcaggcctgggcgaactgctggcggcgtttgagcgtttaaaagcgcagttg
gaaggtgaaggtgtgtttgccaacgcccggccgctgcccttcccgccccgcaagctgctg
atattgagctctgccaccggggcagccattcgcgatgtgctggcggtgctggaagcgcgc
tggccgctggcggacgtgacactgattccggtgccggtgcaaggcgccgaagccgccccg
gcaatgatttcggccctagggttattaaaccgccaagcgaagctagacccggaacgggat
gtggtgctcattacccgtggcggcggcagcttggaagacctgtgggcgtttaataacgag
catttggcgcgggcaattttccattcccggctgccggtaatgtcggcggtgggccacgag
gtggatatcaccctggcagattttgccgcggatatgcgcgctcccaccccttctgccgct
gctgagcgcctggtgccggatcaaaacacccttaagcgccagctggagcatcaacacagc
cgcctgctgcgggccatgcaggcgcgcctagagcgcgacagccagcggctggataccctg
cgcgccaagctgcgtcmtcccggcgagcagctcaaccgtcagcgccagcacttaaccgcc
ctcaatcagcgcttgaatcgcgccatgcagcacacgcttggcctgcagaaagcccaggtg
acacagctgagcaggcgcttggccagccaggatatggcgcggttgcaccgtgcagaaagc
gagcgtgtgagccagttacagcgccgtttggggagtgcgatgcagcgccagttggagagc
cgacaggcacgcttgaaagccgccgcacgggagttaaacgcggtcagtccgctagcggtg
ctggggcgtggctatgcaattgcccaggatgagcagggccaggtcattcgccgcgcggaa
gatacccagcccggccagaagctgaaactgaagctaggtgaaggcaggctaagcgtggaa
gttaagcggcgtttaaagtcctaa
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