Halomonas sp. R57-5: HALO3999
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Entry
HALO3999 CDS
T04029
Name
(GenBank) Putative uncharacterized protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ham03016
]
HALO3999
Transfer RNA biogenesis [BR:
ham03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HALO3999
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
NAD_binding_7
Pyr_redox_2
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
Shikimate_DH
3HCDH_N
Spermine_synth
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
CEP37681
LinkDB
All DBs
Position
I:complement(4375171..4376046)
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AA seq
291 aa
AA seq
DB search
MSSTVSSNEPPPVAAGSASTXHDLRFGGIRRLYGQRAFDAFRHAHVVVVGVGGVGSWTVE
ALARSGIGKLTLIDLDDVCVSNVNRQLHALDGTIGQPKVEVLAERCRLIAPEIEVVADTA
FVTPTNLAERIPDDADHVVDAIDSVIAKAALIAWCKRRKIPITVTGAAGGQTDPTRIQVA
DLTRTEHDPLLSKVRSRLRRDYGFSRNPKRRFSVECVYSDEQLVYPGADGEVCLQKPGSG
DATRLDCASGFGAATFLTGTFGFVAASKVLERLAKKANQPAVANATQEESS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaactgtgtcatcgaacgagccacctcctgtcgctgcaggctcagcttctaca
gmccatgacttacgctttggtgggattcgccgcctctacggtcaacgtgcctttgatgca
tttcgccacgctcacgtggtagtggtgggtgttggcggggtggggagctggacggttgag
gcactggcgcgttcgggcattggcaaactgacgctgattgatcttgatgacgtgtgcgtt
tccaacgttaaccgccagctccacgccttggatggcacgattggtcagcccaaggtggag
gtgcttgctgagcgctgccgtttgattgccccggaaatcgaggttgtagccgacactgcc
tttgtgacacccaccaacctggccgagcggattcccgacgatgccgaccacgtggtggat
gccatcgacagcgtgattgccaaggctgccctgatcgcctggtgcaagcgacgcaaaata
ccgattaccgtgaccggtgctgcgggcgggcaaaccgacccgacgcgtattcaagtggcg
gatctcacccgtaccgagcacgacccgctgctatccaaagtgcgctcgcggctgcgtcgg
gattacggcttctctcgcaatcccaaacggcgcttctctgtggagtgcgtctactctgac
gaacagttggtgtaccccggcgccgacggtgaagtctgcctgcaaaagcccggcagcggc
gacgccacccggttggactgcgcttcgggctttggtgccgctacctttttgaccggcact
tttggctttgtggccgcctccaaagtgctggaacgcctggccaaaaaagccaaccagcca
gctgtcgcaaacgccacccaagaggagagctcatga
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