Halomonas sp. R57-5: HALO4016
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Entry
HALO4016 CDS
T04029
Name
(GenBank) Permease YjgP/YjgQ
KO
K11720
lipopolysaccharide export system permease protein
Organism
ham
Halomonas sp. R57-5
Pathway
ham02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HALO4016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ham02000
]
HALO4016
Transporters [BR:
ham02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
HALO4016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
DUF3169
Motif
Other DBs
NCBI-ProteinID:
CEP37698
UniProt:
A0A0D6EDD6
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All DBs
Position
I:complement(4394464..4395543)
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AA seq
359 aa
AA seq
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MLKLLTVADRLDRYIARNVLAAIIVVQFVLLGLDITIAYIDDLGDVQAGYTALDALLYLL
MRTPWRFYQYAPVAVLIGALIGLGSMASSNELTVMRAAGRSLARIVWGVMKPVLVVVVVV
LLVAEYVSPRTEQYAEAWRLEKLQGEGAMLTSRSGWQIEGDSVYRFGAIRADDVVLDLTR
YRFDDRQLVEATYAQRARWEGDAWRLENVATTRIFDDHTESEQTASMGWETSFTPTQLER
LLRDIESQAPSELWAYAQFLEAQNLQNDQALLYFWQKMLMPLTMGSLVLIAASFVFGPLR
TVAAGTRVFYGVITGLSFKYVQDLLAPASTIFGFSPVWAVLVPTLACAGVGIYFLRRNG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagttgttaacggtagctgatcgtcttgatcgttacatcgcccgcaacgtactg
gcggccattatcgtcgtccagttcgtgctgcttgggttggatattaccattgcctatatc
gatgatttaggtgatgtacaggcgggttataccgcgctcgatgcattgctttacctgctt
atgcgcacgccttggcgcttttatcagtatgcccctgtggcggtattaatcggcgcgcta
attggcttgggcagtatggcctcaagtaacgagctcaccgttatgcgcgctgctgggcgt
tcgctggcgcgcatcgtgtggggcgtgatgaaaccggtgctggtggtcgtcgttgtggtg
ctgctggtcgctgagtatgtcagcccgcgcaccgagcagtatgccgaggcgtggcgattg
gaaaaacttcagggcgaaggcgctatgctgaccagccgcagcggctggcagatcgagggc
gacagcgtctaccgtttcggggcgattcgtgccgatgatgtggtgctcgacttaacccgc
tatcgctttgatgaccgccagcttgtcgaagccacctacgcccagcgggcacgttgggaa
ggcgatgcctggcggttggaaaacgtggcgaccacgcgcatttttgacgaccacaccgag
tccgaacagacggcaagcatgggctgggaaacgtcctttacccccacccagttagagcgg
ctgctgcgcgatatcgagagccaggcgcccagcgaactgtgggcctatgcccagttcctt
gaagcgcaaaacctgcagaatgaccaagcgctgctgtatttttggcagaagatgctgatg
ccgctgaccatgggctcgctggtgctgattgctgcctcctttgtgtttggaccgctgcgt
acggtggctgcaggcacccgggtattttacggcgtgatcactgggctgagctttaagtat
gttcaggatcttctggcgcccgcctcgacgatttttggcttctcgcccgtctgggcggtg
ctggtgccgacactggcgtgcgccggggtcgggatctactttctacgtcgcaacggttaa
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integrated database retrieval system
