Halomonas sp. R57-5: HALO4087
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Entry
HALO4087 CDS
T04029
Name
(GenBank) Nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ham03000
]
HALO4087
03036 Chromosome and associated proteins [BR:
ham03036
]
HALO4087
Transcription factors [BR:
ham03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HALO4087
Chromosome and associated proteins [BR:
ham03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
HALO4087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_16
TetR_C_13
HTH_11
HTH_AsnC-type
HTH_20
HTH_Tnp_1
HTH_24
TetR_C_6
HTH_10
HTH_29
HTH_23
HTH_7
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
CEP37769
UniProt:
A0A0D6EEL8
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All DBs
Position
I:4469634..4470242
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AA seq
202 aa
AA seq
DB search
MSEDRKPRRREQILQALALMLEEDSGKRITTAALARQVGVSEAALYRHFPSKARMFEGLI
DFIEESIFARITRILEDVPDATTRCGTILALLLGFAEKNPGLARVMGGDVLTGETARLRQ
RVNQLFERLEMQLKQILREAEIREGLRPTIPASAAANLLAAQAEGRISQYVRSDFKRLPT
EHWEDQWSLLSAQLLRATAQPA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagatcgcaaaccacgccgccgcgagcagattctccaagccctggcgttaatg
cttgaggaagatagcggcaagcgcattaccacagccgctctcgcccgccaggtcggcgtt
tcagaagcggcgctctaccgccacttccccagcaaagcgcgtatgtttgaggggctgatc
gactttattgaagagagtatttttgcccgcatcacgcgcattctggaagacgttccagac
gccaccactcgctgcggcaccatacttgcactgctgctgggctttgctgaaaaaaatcct
ggtttggcgcgggtgatgggcggcgacgtgctcaccggtgaaaccgcaaggctacgacag
cgggtaaaccagctgtttgagcgcctggagatgcagcttaagcagatcctgcgcgaagcc
gagatacgtgaagggctgcgccccacgatccccgcctctgccgctgccaacttgctggcg
gcccaggcggaggggcgaatttcmcagtatgtgcgtagcgactttaagcgcctgcccacc
gaacactgggaagatcagtggtcactgctgtcagctcagttactgcgtgccacggcgcag
cctgcttaa
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