Halomonas sp. R57-5: HALO4088
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Entry
HALO4088 CDS
T04029
Name
(GenBank) RNA polymerase sigma factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ham03021
]
HALO4088
Transcription machinery [BR:
ham03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HALO4088
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UPF0231
UCR_14kD
KORA
Motif
Other DBs
NCBI-ProteinID:
CEP37770
UniProt:
A0A0D6EDS8
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Position
I:complement(4470347..4471213)
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AA seq
288 aa
AA seq
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MSTSLLPVGQLSPGGDLGGYIRAVNGISVLTADEERELAYRLYDEGDLEAARRLVLSHLR
FVVHIARSYSGYGLPQADLIQEGNVGLMKAVKRFDPNQGVRLVSFAVHWIKAEIHEFVLR
NWRIVKIATTKAQRKLFFNLRGAKKRLAWLNNDEVDAIAKDLDVKPEVVRDMEGRLSSYD
AGYDAPAGDDEESTYQAPVHFLDDAASDPATQLEDSNFEEDSTRRLQLALEGLDERSRDI
LQRRWLADSKETLHDLADVYGVSAERIRQLEKNAMKKLRQKMGDTLAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagtcttctaccggtggggcaactttcacccggcggcgacctcggcgggtat
atccgcgcggtcaatggaatttcggtattaacagccgatgaagagcgcgagcttgcctat
cgtctctacgatgagggcgatttggaagccgctcggcgtttggtactttcgcatctgcgc
tttgtggtgcatatcgcgcgtagctattcgggctatgggttgccccaggcagatttgatc
caagaaggtaacgtcggcttgatgaaagccgtcaagcgcttcgatcccaatcagggcgtt
cgcttggtctcttttgccgtgcactggatcaaagcggaaattcacgaatttgtgctgcgc
aattggcgaatcgttaaaatcgcgaccactaaagctcagcgtaagctgttctttaatttg
cgtggtgccaagaagcgtctggcctggttgaataacgacgaagtcgatgcgattgctaaa
gacctcgacgtcaaacctgaggtcgtgcgcgatatggaagggcggctctcttcttacgat
gcgggttacgacgcaccggcaggcgatgatgaagagagcacttatcaagcgccagtgcac
ttcttggacgatgctgcttccgaccctgccacacagctggaagatagcaacttcgaggaa
gactcgacgcgccgtttacagcttgcccttgaggggttggatgagcgctcgcgagatatt
ctgcagcgccgttggttggccgatagcaaagagacgctgcatgatctggccgatgtttac
ggggtcagcgccgagcgtattcgtcagcttgaaaaaaatgccatgaaaaagctgcgtcag
aaaatgggcgacacgctggctgcgtaa
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