Halomonas sp. R57-5: HALO4200
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Entry
HALO4200 CDS
T04029
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ham03016
]
HALO4200
Enzymes [BR:
ham01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HALO4200
Transfer RNA biogenesis [BR:
ham03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HALO4200
Prokaryotic type
HALO4200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF6417
Motif
Other DBs
NCBI-ProteinID:
CEP37882
LinkDB
All DBs
Position
I:complement(4600047..4600967)
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AA seq
306 aa
AA seq
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MARQRRGLPVNGVLLLDKPKGVSSNHALQRVRRLFQAQKAGHTGTLDPMATGLLPICLGE
ATKFSSHLLEADKVYRTRIELGVITDTGDAEGTIIEQHEVPSLSADDVETVLTRFRGEID
QVPPMYSALKHQGKKLYELAREGKHVERAARRVSVYDARLLSFEGSAFELEVSCSKGTYI
RTLAEDIGQALGCGAHISQLRRLKTGPFLADAMWTLEALEALADQAALEAELMPVDVLVD
HLPLLTVDDTAHARLAHGQPAALETGALAADEVARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcgtcaacgtcgtggtttgccggtcaatggcgtactgctgctggataagcccaaa
ggcgtttccagcaaccatgcgctgcagcgtgtacgtcggctgttccaggctcaaaaagcc
gggcacaccggcacgctcgacccgatggcaaccggcttattgccgatttgcctaggcgaa
gcgaccaagttctcgtcgcacttgctggaagccgacaaggtgtatcgcacccggatagag
cttggggtgatcaccgataccggcgatgcggaaggcacgattattgagcagcatgaggtt
cccagtttaagcgccgatgacgtggaaactgtgctcacccgctttcgcggtgagattgac
caagtgcctcccatgtactcggcgctaaagcatcagggcaaaaaactttacgagttagcc
cgcgaaggcaaacacgtagagcgtgcagctcggcgggtaagcgtgtatgatgcgcgcctg
ctatcgtttgaaggcagcgcttttgagctggaagtaagctgcagtaaaggcacttacatc
cgcacgttagccgaagatattggtcaagcgcttggctgtggtgcgcacatcagtcaacta
agaaggctcaaaacagggccctttttagccgacgcgatgtggacgctagaggccttggaa
gcactggccgaccaggcagcactggaagctgagctaatgcccgtggatgtgctggtggat
catttgccgttactgacggtagacgacaccgcccacgcccgtttggcccatggccagccc
gctgctctcgaaaccggcgcattagccgcagacgaagtagccagactttattacgccgag
acgtttatcggccttggcgtagtgaaaggtgcccaggaagtggcgcctaagcggctgtta
agtaccgtcgctatctcgtaa
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