Halomonas sp. R57-5: HALO4203
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Entry
HALO4203 CDS
T04029
Name
(GenBank) Transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ham03021
]
HALO4203
03009 Ribosome biogenesis [BR:
ham03009
]
HALO4203
Transcription machinery [BR:
ham03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HALO4203
Ribosome biogenesis [BR:
ham03009
]
Prokaryotic type
rRNA transcription factors
HALO4203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
DUF4332
KH_NusA_C
RNA_pol_Rbc25
Glyoxalase_4
S1_RRP5
KH_KhpA-B
MRP-S35
Motif
Other DBs
NCBI-ProteinID:
CEP37885
UniProt:
A0A0D6EE69
LinkDB
All DBs
Position
I:complement(4604024..4605520)
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AA seq
498 aa
AA seq
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MVVDAISNEKGVPRDVIFEAVEAALASASRKRFEKEEANVRVHIDRRTGEYETFRTWTVV
EDDEFETPDYEIKESIAEQRDPPLKLGDVVEKSIENASFGRIAAQTAKQVIVQKVREAER
AEVVRQYADREGELVAGIVKKTTRDGLIIDLGENAEAFLPRNEMIHGERYRMNERVRALL
VKVDPDARGAQLQLSRTCPELIIELFKIEVPEIAEQLIEIKGAARDPGSRAKIAVKTNDR
RIDPVGACVGMRGSRVQAVSSELQNERVDIVLWDDNPAQLVINAMAPADVGSILVDEDAH
AMDVAVAQDNLAQAIGRSGQNVRLASELTGWRINVMTEEEAESKRDQEIDXLVDSFIQHL
DVDEDVARLLVDEGFTTLEEVAYVPMEEMLEIEEFDEDLVEALRARAKDELLTMAIATEE
ALDGAQPAADLLEMDGMERHLAFILASRGIVTMEDLAEQSVDDLVDIEELDEARAAALIM
TARAPWFEVDDASDSNTQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttgacgcgatctccaatgagaagggcgtcccgcgtgatgtcatcttcgaagcg
gtcgaagccgctcttgcgagcgcgtcacgtaagcgttttgaaaaagaagaagccaatgtg
cgcgtgcatattgaccgtcgtactggggaatatgaaacgttccgcacctggacggtcgtc
gaagatgacgaattcgaaacgcccgactacgaaatcaaagaaagcatcgccgagcagcgt
gatccgccgcttaaattaggcgatgtggtggaaaaaagcatcgaaaatgcgtcgttcggt
cgtattgcggcgcaaaccgctaagcaggtgatcgtacagaaagtacgtgaagctgagcgg
gcagaagtggtgcgccaatatgctgatcgcgaaggcgaactggtagcgggcatcgttaaa
aagaccactcgcgacggcctgatcattgatttgggcgaaaacgctgaggcgtttttgccg
cgcaatgaaatgattcacggtgagcgttaccgcatgaacgagcgggtacgtgccctgttg
gtcaaggtagacccagacgcacgcggtgcccagcttcagctatcgcggacgtgccccgag
ctgatcatcgagctgttcaaaattgaagtgccagagatcgcagagcagttgattgagatc
aaaggtgctgcgcgtgaccccggttcacgggccaaaattgcggtaaaaaccaatgatcgc
cgcatcgacccggtcggtgcctgtgtgggtatgcgcggttcacgcgttcaagcggtctct
tcggagctgcaaaacgaacgcgttgatatcgtgctgtgggatgacaatcccgcccagttg
gtgattaacgccatggcacctgccgatgttgggtctatccttgtggacgaggatgcccac
gcaatggatgtggccgtggcgcaggataaccttgctcaggcgattggtcggagcggtcag
aacgtgcgtttggcttctgaacttaccggctggcgcattaatgtcatgaccgaagaggaa
gcggagtctaagcgcgatcaagagattgatarcctggtggactcttttatccagcacctc
gatgtggatgaagatgtcgctcgcctgttggtggatgaggggttcactaccctggaagaa
gtcgcctacgtgccgatggaagagatgctcgaaatcgaagagttcgatgaagatttagtc
gaagcgcttcgtgcacgtgcgaaagacgagctgctgacgatggccattgccacggaagaa
gcgctagacggtgcccagccagcagcagatctgctggagatggatggcatggagcgccac
ctggccttcattctggccagtcgcggcatcgttaccatggaagatctcgccgagcagtct
gtcgacgatctggtcgatatcgaggagttggacgaagcgcgcgcagcggcactgatcatg
actgcccgtgcgccctggtttgaagtcgatgacgcatcggattcgaacacacagtaa
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