Halomonas sp. R57-5: HALO4410
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Entry
HALO4410 CDS
T04029
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ham
Halomonas sp. R57-5
Brite
KEGG Orthology (KO) [BR:
ham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ham03400
]
HALO4410
Enzymes [BR:
ham01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HALO4410
DNA repair and recombination proteins [BR:
ham03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HALO4410
Prokaryotic type
HALO4410
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CEP38092
UniProt:
A0A0D6EF12
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All DBs
Position
I:4814423..4815850
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AA seq
475 aa
AA seq
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MTGERMKHQLIWLRSXLRIDDNSALAAAAAKGPVIAVFLRSNAQWQQHGHGANKLDFWAR
GVASVKAALNGLNIPLLHRDIERYDQAPEVLLDIAREYAVEQLHFNYEYALNERHRDQAV
QDAFKQAGIAAHGYHDAVAFAPGSLLTGKGDYYGVFTPFSKAWHKQVSADQLALRETPKV
QAALALKSDPLPELPQLDSAPIDGRLWPAGENAAADNLARFLRFRGRHYNAQRDLPKVRG
TSELSPYLALGMISHRQCLQAVMAENGGHVADGDIGLTTWVNELVWREFYQHVAVGFPRV
CRYQPFQEHTKQLAWRDDEEGFQAWCEGRTGYPIVDAAMRQLVTTGWMHNRLRMITAMFL
SKHLLIDWRRGEAFFMKHLVDGEFCANNGGWQWAASTGTDAAPYFRIFNPXTQSTRFDAE
GEFIAHWIPELAKLPAKARHAPPQDLLSDIEYPAPIVDHKAARQRALEAFKSLSK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtgagcgtatgaaacatcagttgatatggctgcgcagtgmcctgcgtattgac
gacaacagtgccctcgccgccgccgcggctaagggccctgtgatagcggtgtttttgcgc
agcaatgcccagtggcaacaacatggccacggcgctaataagctggacttttgggcacgc
ggcgttgcgagcgtaaaagcggcgctcaacggcttgaatatcccgctactgcatcgcgat
attgaacgctatgaccaagcgcccgaggtactgctcgacatcgctcgtgaatatgccgtt
gaacagctgcactttaactatgagtacgcgctcaatgagcggcaccgtgaccaggcagtg
caggacgcctttaagcaggccggtattgccgcccatggttaccacgacgccgtcgccttt
gcccctggcagcctgctaaccggcaaaggcgactactacggggtatttacaccgttttcc
aaagcgtggcacaagcaggtcagcgccgaccagctggcgctgcgcgagacaccaaaggtg
caagcggcgctggctcttaaaagcgatccgctgcctgaactgccccaacttgatagcgcc
cctatcgatgggcggctgtggcctgccggtgaaaatgccgcggcggataacctggcccgc
tttctgcgttttcggggccgccactacaacgcccagcgcgacctacccaaggtgcgcggc
accagcgaactatcgccctatctggcactaggcatgatctcccatcgccagtgtctgcaa
gcggtgatggctgaaaatggcggccatgtggcggatggcgatatcggccttaccacctgg
gtcaacgaactggtgtggcgggagttttatcaacacgtagcggttggctttccccgagtg
tgccgctaccaaccctttcaggaacacactaagcaattagcctggcgcgacgatgaggag
ggttttcaagcttggtgcgaggggcgaacaggctacccgattgtcgatgccgctatgcgc
cagctagtgacgaccggctggatgcacaaccggctgcgcatgatcacggcgatgttttta
agcaagcacctactgattgattggcggcgcggcgaggctttctttatgaagcatttggtg
gatggtgaattctgcgccaacaacggcggctggcagtgggcagcctcaacgggtaccgat
gccgccccttactttcgtattttcaaccctmccacccagtccactcgctttgacgctgag
ggtgagtttattgcccactggattcctgagcttgctaagctgcctgccaaggcgcgccat
gcgccaccacaagacctactcagcgatatcgaatacccggcccccattgtcgaccacaaa
gcggcacgccagcgcgccttagaggcgtttaaatcactgtctaaataa
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